Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03034 ATGGATAATATCCTTTTCATTGCTCTCACTTTTGTGTTATGTTTTCATATTCCTTTTATTCAAGGAATTGAACTGCCCATTGCCAATGGGAGTACAGAGAAAAGCAGTTCAAAAATATACATTGTCCATGTGAACGAACCCGAGGGTAAGATATTTACTCTATCAGAACAAGATTTACAAAGTTGGCATCATTCATTCATGCCGCCTACGATTATGAGCTCCGAGAAACAACCGCGAATGATATATTCATACCGAAATGTGCTGAGTGGCTTTGCTGCAAGACTCACTCAAGAAGAGTTGAGAGATGTGGAACAGAAAAACGGCTTTATTTCAGCTCATCCTGAAAGGACACTACGTCGTCAAACCACACATACTCCAGATTTCTTGGGGTTGCAGCAAAATATTGGATTATGGAAGGATTCAAATTTTGGAAAGGGAGTTATTATTGGTGTTCTGGATTCAGGAATCACACCTGGTCATCCTTCATTCAGTGATGCAGGAATATCACCGCCTCCAGCGAAATGGAAAGGGAGATGCGAACTTAATGGCACAGCTTGTAACAATAAGCTAATTGGAGCAAGATCCTTCAATAATGCAGCTGTGGCAAATAAAGTAGAGAAAGCTGAACCACCAATTGATGAGGATGGACATGGTACTCACACGGCAAGTACAGCGGCAGGTGCTTTTGTGGAAGACGCAGAAGTACTAGGAAATGCCAAAGGCACGGCAGCAGGGATGGCTCCTCATGCTCACCTAGCAATTTACAAAGTATGTTTTGGTGACGACTGTCCTGAGAGTGATATACTAGCGGCATTAGACGCAGCTGTGGAGGATGGTGTGGATGTAATATCCATATCGCTTGGTCTAAGTGAACCTCCTCCATTTTTCAATGATAGCACTGCCATAGGCGCTTTTGCAGCAACGCAGAAGGGAATTTTTGTAAGCTGTGCAGCAGGAAACTTTGGCCCTTCTGATGGCTCCTTGGTTAATGGAGCTCCATGGATCCTCACAGTTGGAGCAAGCACTATTGACAGAAGCATTGTAGCAACAACAGTGCTTGGAAATGGAGAAGAATTCGAGGGCGAATCTGTTTTCCAGCCTTCCGATTTCTCTCCAACATTGTTGCCCTTAGCATTTGCAGGAATCAATGGAAAACAAGAATCTGCACTTTGTGGTAATGGATCCTTGAATGACATTGATTTCAGAGGAAAGGTTGTTTTGTGTGAAAGGGGAGGGGGTATAGGAAGAATTGCCAAAGGACAGGAAGTAAAAAGAGTAGGAGGGGCCGCCATGATTCTCATGAATGATGAAATCAATGGTTTTAGTCTCTCAGCTGATGTACATTTCCTACCAGCAACACATGTCAGCTATGCAGCTGGACTAAAGATCAAAGCATATATAAATTCAACTTCAACACCTACAGCAACCATTTCGTTTAAGGGAACGGTTATCGGAAACTCCTTATCGCCAGCCGTTGCATCCTTTTCTTCAAGAGGCCCCAACTTGCCGAGTCCTGGTATATTGAAACCAGATATTATCGGACCAGGCGTGAACATCCTAGCCGCCTGGCCGTTTCCCTTGAATAACAGCACTGATTCCAAACTCAATTTCAACATTATGTCCGGAACATCAATGTCATGCCCACATCTTAGTGGCATTGCTGCTTTGCTCAAAAGCTCTCATCCTGATTGGTCACCAGCTGCCATAAAATCTGCCATAATGACTTCTGCAAATACGCTAAATTTAGAAAACAAACCCATTGTTGACGAAACACTTCAGCCAGCAAATTTCTTTGCCACAGGTTCGGGGCACGTGAATCCGTCAAGAGCAGATGATCCCGGATTAGTATATGATATCCAACCTGATGATTATATACCTTATCTGTGTGGTTTAGGATACAGTGATAGGGAAGTCGGAATCATTGCACACAGAACAATTAACTGCGCTGAAACATCAAGCATTCCTGAAGGAGAGCTTAACTACCCCTCATTTTCTGTTGTGCTTGGCTCCTCACAGACACTCACAAGGACAGTGACAAATGTCGGCGAGGCCAACTCATCTTATGTAGCCGTCGTAACAGCGCCAAAAGGGGTGGATGTAAAAGTCCAGCCACAAAAGCTTTACTTTTCAGAAGCCAACCAGAAAGAAACATATTCAGTGACATTCAACTGTTTAAAAAATGGTAATAAGACAGGAGAATTTGCTCAAGGATCTCTGAAATGGGTCTCTGCTAAACACACTGTCACGAGCCCTATCTTGGCCAAATTTGCATAG 2274 0.434 MDNILFIALTFVLCFHIPFIQGIELPIANGSTEKSSSKIYIVHVNEPEGKIFTLSEQDLQSWHHSFMPPTIMSSEKQPRMIYSYRNVLSGFAARLTQEELRDVEQKNGFISAHPERTLRRQTTHTPDFLGLQQNIGLWKDSNFGKGVIIGVLDSGITPGHPSFSDAGISPPPAKWKGRCELNGTACNNKLIGARSFNNAAVANKVEKAEPPIDEDGHGTHTASTAAGAFVEDAEVLGNAKGTAAGMAPHAHLAIYKVCFGDDCPESDILAALDAAVEDGVDVISISLGLSEPPPFFNDSTAIGAFAATQKGIFVSCAAGNFGPSDGSLVNGAPWILTVGASTIDRSIVATTVLGNGEEFEGESVFQPSDFSPTLLPLAFAGINGKQESALCGNGSLNDIDFRGKVVLCERGGGIGRIAKGQEVKRVGGAAMILMNDEINGFSLSADVHFLPATHVSYAAGLKIKAYINSTSTPTATISFKGTVIGNSLSPAVASFSSRGPNLPSPGILKPDIIGPGVNILAAWPFPLNNSTDSKLNFNIMSGTSMSCPHLSGIAALLKSSHPDWSPAAIKSAIMTSANTLNLENKPIVDETLQPANFFATGSGHVNPSRADDPGLVYDIQPDDYIPYLCGLGYSDREVGIIAHRTINCAETSSIPEGELNYPSFSVVLGSSQTLTRTVTNVGEANSSYVAVVTAPKGVDVKVQPQKLYFSEANQKETYSVTFNCLKNGNKTGEFAQGSLKWVSAKHTVTSPILAKFA 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03034 757 SUPERFAMILY PA domain 383 471 IPR046450 -
Vifa4g03034 757 CDD PA_subtilisin_like 352 477 - -
Vifa4g03034 757 FunFam subtilisin-like protease SBT1.5 344 484 - -
Vifa4g03034 757 CDD Peptidases_S8_3 121 578 IPR034197 -
Vifa4g03034 757 SUPERFAMILY Subtilisin-like 121 615 IPR036852 GO:0004252|GO:0006508
Vifa4g03034 757 ProSiteProfiles Serine proteases, subtilase domain profile. 128 611 - -
Vifa4g03034 757 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 40 752 IPR045051 -
Vifa4g03034 757 Gene3D - 344 484 - -
Vifa4g03034 757 Gene3D Peptidase S8/S53 domain 146 624 IPR036852 GO:0004252|GO:0006508
Vifa4g03034 757 Pfam Subtilase family 144 585 IPR000209 GO:0006508|GO:0008236
Vifa4g03034 757 Pfam Fibronectin type-III domain 658 753 IPR041469 -
Vifa4g03034 757 Pfam PA domain 391 463 IPR003137 -
Vifa4g03034 757 FunFam Subtilisin-like protease SBT1.5 146 388 - -
Vifa4g03034 757 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 149 160 IPR023827 -
Vifa4g03034 757 Gene3D - 628 756 - -
Vifa4g03034 757 Pfam Peptidase inhibitor I9 40 119 IPR010259 -
Vifa4g03034 757 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 27 120 IPR037045 -
Vifa4g03034 757 PRINTS Subtilisin serine protease family (S8) signature 213 226 IPR015500 -
Vifa4g03034 757 PRINTS Subtilisin serine protease family (S8) signature 541 557 IPR015500 -
Vifa4g03034 757 PRINTS Subtilisin serine protease family (S8) signature 144 163 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g03034 Vifa-Chr4 976532944 976535217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g03034 11 752 Subtilisin-like Serine Gene Family AT1G04110 45.431 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03034 - - gmx:100785376 1216.06