Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa4g03004 | ATGGCAAAAGGTAGCTCCAGCAACAACTATGAAGAGGCTAGAAAACAAAGATTGGAACAAAACAATAAGAAAATTGCGGATTTAGGGATTTCAAAGATTTCTAAACAATTGACTAAAATCGGAAGTTCTTCAAACAAGTCACAGAAACGCCGTGTCAAACGAGAATTAAAGACTAATCATGTAGCGGAACAAAGGTGCTCTTCTCGTGCAAGAAACAAAGCTCCTTCATACAGTGAAGAGTTTCCTACAGACCTTCCTCATAAGAGTTCACGTCTACGGAAGAGGTCAAGGTCAAGTCCATCATCATGGGGAAGTTACATTGCGAGGCCACTCGATGAAATCAAAGAAGCTACGAAACAAGAAAGAGACCGTGCTTATAAGGCTGCAGAGAAACTGGAAATCAATTTGCAGTCTCCAAATCCATCATTTGCCAAGTCAATGGTCCGGTCTCATGTTTATAGCTGTTTTTGGTTGGGTCTTCCTAGTAGATTTTGTCAGGACCATCTTCCAAAAGAGGGAAGTGGGCTAAGTGGTGGCTGGAGAGCATTTGCATTGCAACATAAATTGGATGATGGTGATGCACTTGTTTTTGAATTGGTTCAAGCAAACAGATTTAAGATTTATATTGTTAGTGCATTTCCAAATATTAGTGAAAAAGAGGAAGAAGAAAACAATACTTTGGTGGAAGAAGAAAATATGCACACATCCAAAACAACAAAAAAAATGAAGGCTGCAAGTAACCATGAATCAGCATCGAAGAAGACTAAAAAGCGAAAACATGCCATTAAAACTAAGGAATCAGAGAATTCTGAAGAAAGTCTGCCAGAAAGTAACATTGACAAAGAGTCCAAACCTCAGAGGGTAAATTCTAGTAGAAAAACTAAATCTTCTCAGAAAGAAATGCAAAAGATATCTGAAGTACCAAGTACTCCTGAGCCAAAAGAGGAACCACAGATTGAAGTTGTGAAACCAAAGGAAGCTATAAAGAAAACTAGATCTTCTCAGAGGAAAATGCAAAAGATATCTGAAGTACCAATTACTCCTGAGACAAAAGAGGAATCACAGATTGAAGTTGTGAAACCAAAGGAAGCTATAAAGAAAACTAGATCTTCTCAGAGAAAAGTGCAAAAGATATCTGAAGTATCTACTACTCTTGAGCTAAAAGGTGAAGCACAAGTTGAAACTGTGAAACCAAAGGAAGCTACAAAGTTGTCAAAGAAGACAAGGAAGTCCAAAGAAGGTAACTTGAGCAAGAAGGAAGAACATGTTCAGGATGATGCGATTGAGTCAATGAAAGATGTTCAGGATGATGCGATTGAGTCAATGAAAGATGTTCAGGATGATGCGATTGAGTCAATGAAAGATAAGCCAGATGAAAAACCAAGCAAAGAAGTTTCACAAAAACCTCGAAAAAAAGCAGCTGTTAAGTTTTTCAGTAGGAAAACATCAATTTCCAATTTAATATGCGTGGTTAAAAAGTCTTAG | 1485 | 0.3764 | MAKGSSSNNYEEARKQRLEQNNKKIADLGISKISKQLTKIGSSSNKSQKRRVKRELKTNHVAEQRCSSRARNKAPSYSEEFPTDLPHKSSRLRKRSRSSPSSWGSYIARPLDEIKEATKQERDRAYKAAEKLEINLQSPNPSFAKSMVRSHVYSCFWLGLPSRFCQDHLPKEGSGLSGGWRAFALQHKLDDGDALVFELVQANRFKIYIVSAFPNISEKEEEENNTLVEEENMHTSKTTKKMKAASNHESASKKTKKRKHAIKTKESENSEESLPESNIDKESKPQRVNSSRKTKSSQKEMQKISEVPSTPEPKEEPQIEVVKPKEAIKKTRSSQRKMQKISEVPITPETKEESQIEVVKPKEAIKKTRSSQRKVQKISEVSTTLELKGEAQVETVKPKEATKLSKKTRKSKEGNLSKKEEHVQDDAIESMKDVQDDAIESMKDVQDDAIESMKDKPDEKPSKEVSQKPRKKAAVKFFSRKTSISNLICVVKKS | 494 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa4g03004 | 494 | Gene3D | - | 117 | 173 | IPR015300 | - | |
Vifa4g03004 | 494 | Gene3D | - | 174 | 213 | IPR015300 | - | |
Vifa4g03004 | 494 | SMART | B3_2 | 143 | 213 | IPR003340 | GO:0003677 | |
Vifa4g03004 | 494 | ProSiteProfiles | B3 DNA-binding domain profile. | 176 | 213 | IPR003340 | GO:0003677 | |
Vifa4g03004 | 494 | PANTHER | B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED | 173 | 213 | IPR044837 | - | |
Vifa4g03004 | 494 | MobiDBLite | consensus disorder prediction | 219 | 251 | - | - | |
Vifa4g03004 | 494 | MobiDBLite | consensus disorder prediction | 316 | 337 | - | - | |
Vifa4g03004 | 494 | Coils | Coil | 115 | 135 | - | - | |
Vifa4g03004 | 494 | MobiDBLite | consensus disorder prediction | 23 | 103 | - | - | |
Vifa4g03004 | 494 | MobiDBLite | consensus disorder prediction | 219 | 355 | - | - | |
Vifa4g03004 | 494 | MobiDBLite | consensus disorder prediction | 392 | 471 | - | - | |
Vifa4g03004 | 494 | CDD | B3_DNA | 141 | 209 | IPR003340 | GO:0003677 | |
Vifa4g03004 | 494 | SUPERFAMILY | DNA-binding pseudobarrel domain | 136 | 210 | IPR015300 | - | |
Vifa4g03004 | 494 | MobiDBLite | consensus disorder prediction | 391 | 472 | - | - | |
Vifa4g03004 | 494 | MobiDBLite | consensus disorder prediction | 262 | 300 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa4g03004 | Vifa-Chr4 | 964093250 | 964097221 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa4g03004 | 10 | 210 | B3 DNA Binding Superfamily | AT5G58280 | 44.758 | 8.72e-59 | 194 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa4g03004 | - | - | cam:101498339 | 459.914 |