Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02960 ATGGCGTTTTACGGTCGCGTCAAATCCGGGATATCTCTTCTTTCTTCTCAGAGATCTACTCTTCAACGCTCTCTCATCGCGCCTTCCATTTCCCAGGCCTTCAGAAATTTTGCTCATGTGCCGGGGCAAAAGGAAACCAAAATTAAGGTCCCCATCGCAATGTTTGGAGGTTCAGGAAACTATGCCTCTGCTTTGTATATTGCAGCAGTGAAAGTTAATTCGGTCGACAAGGTTGACTCTGAGCTTCTTCAGTTTGTTGAGGGAGTAAAGGGTAGTCCCATAACCTCACAATTTATAAAGGATATATCTGTGGCTAAGGATGTTAGAGTAAAAGTCATCCAAGATATTGCCACCCAAGCTAAGTTCTCTGATGTCACAAAGAACTTCCTTGTTCTCCTTGCTGAGAATGGCAGACTTAAAAACGTAGATACCATTGCAAAGAGGTTTGCAGAGTTGGCAATGGCATATAAGGGAGAAGTGAAAGCAACCGTGACTACTGTCATTTATTTTTTTGACCACAAATGTCGTACCTACTCTCATGATAAGTTAATTGAGGTTAAGGAGGATTGGGCTACTTATGTGGTGGATGATGTTTTCGGAAAACAAGAAGCAATTATTTTGCCTAATTAG 630 0.4175 MAFYGRVKSGISLLSSQRSTLQRSLIAPSISQAFRNFAHVPGQKETKIKVPIAMFGGSGNYASALYIAAVKVNSVDKVDSELLQFVEGVKGSPITSQFIKDISVAKDVRVKVIQDIATQAKFSDVTKNFLVLLAENGRLKNVDTIAKRFAELAMAYKGEVKATVTTVIYFFDHKCRTYSHDKLIEVKEDWATYVVDDVFGKQEAIILPN 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02960 209 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 58 158 IPR026015 -
Vifa4g02960 209 Gene3D - 57 150 IPR026015 -
Vifa4g02960 209 Pfam ATP synthase delta (OSCP) subunit 59 168 IPR000711 GO:0015986|GO:0046933
Vifa4g02960 209 PANTHER ATP SYNTHASE DELTA CHAIN 37 168 IPR000711 GO:0015986|GO:0046933
Vifa4g02960 209 PRINTS ATP synthase delta subunit signature 127 138 IPR000711 GO:0015986|GO:0046933
Vifa4g02960 209 PRINTS ATP synthase delta subunit signature 57 76 IPR000711 GO:0015986|GO:0046933
Vifa4g02960 209 PRINTS ATP synthase delta subunit signature 138 152 IPR000711 GO:0015986|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02960 Vifa-Chr4 944834841 944838657 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g02960 97 168 Primary Pumps ATPases AT5G13450 55.556 1.41e-20 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02960 K02137 - gmx:100790990 251.136