Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02931 ATGTCTTCTAGTTCTAGTTCTCCCATGTTGTTGCTCCTCCTCATTACAACACTCTTCATTTCACATTCTTCATCTCAAATGCAACTATTACCTCTAACACACTCACTTTCCAAAACACAACAATTCAACACCACTCACAACCTCCTCAAATCCATCACCACTCGTTCCATATCACGCTTCCACCACCATAAACACCACCATCAACTCTCTCTAGGATCCGACTACACTCTCTCTTTCAACATTGGTCCTCACTCTCAACCCATCACTCTCTACATGGACACAGGAAGTGACCTTGTCTGGTTCCCTTGCACCCCTTTTAACTGCATACTCTGTGAACTCAAACCCAACCCTTCTTCTTCTTCTTCTTCTCCTCCCCACACCAACATCTCCCACAGCGTTCCCGTTTCATGCAGCTCCAAAGCATGCTCTGCAGCATACAGTTCCATCTCTTCTTCCAATCTCTGTGCAATGGCTTGTTGCCCATTAGATTACATAGAAACCAAAGACTGTGGTTTCTTTCACTGTCCACCGTTTTACTATGCATACAGCGACGAAAGCTTGATCGCTCGTTTCTATCGTGATACACTTTCTCTTTCTTTGCTGCAACTCAGAACTTCACATTCGGTTGTGCTCATACCACGTTTTCAGAACCCACCAGAGTTGCTGGGTTTGGCCGTGGCTTACTCTCTCTCCCAGCTCAGTTAG 705 0.4553 MSSSSSSPMLLLLLITTLFISHSSSQMQLLPLTHSLSKTQQFNTTHNLLKSITTRSISRFHHHKHHHQLSLGSDYTLSFNIGPHSQPITLYMDTGSDLVWFPCTPFNCILCELKPNPSSSSSSPPHTNISHSVPVSCSSKACSAAYSSISSSNLCAMACCPLDYIETKDCGFFHCPPFYYAYSDESLIARFYRDTLSLSLLQLRTSHSVVLIPRFQNPPELLGLAVAYSLSQLS 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02931 234 Gene3D Acid Proteases 60 217 IPR021109 -
Vifa4g02931 234 Pfam Xylanase inhibitor N-terminal 75 163 IPR032861 -
Vifa4g02931 234 SUPERFAMILY Acid proteases 71 201 IPR021109 -
Vifa4g02931 234 ProSiteProfiles Peptidase family A1 domain profile. 75 234 IPR033121 -
Vifa4g02931 234 PANTHER ASPARTYL PROTEASES 10 202 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02931 Vifa-Chr4 939451021 939451725 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02931 - - pcin:129295927 187.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g02931 4 939451021 939451725 Vifa4g02931 4 939451021 939451725 ECH
Vifa4g02931 4 939451021 939451725 Vifa2g03372 2 971310494 971312744 ECH