Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02883 ATGTTCCATTCTCACCGTCTCAAAGCTGTTGTCTACCTCAACCATCTTTCTTCAACTCCAAAATCTCACCACCTTCTTCACTCTCTCAATCCCTTCTCCACCACTTCAGATTCCTTCACCCTATCCTACTTCACCAACAACTGTGGCTTATCTCCACAAGACGCTCTCAAAGCCTCAAAACGACTCCGTCTCACTTTCACCACACCCGAAAAACCCAACTCCGTTATCGCCTTCTTCAAAACCCATGGTTTCTCCATTCCCCAAATCCAATCCATCATTCTCAAGAACCCCCAACTCATCCTCTCCAACCCCACCAAAACCATTCTCCCTAAGTTTCAATTTTTAGCCTCCAAAGGCGCTTCTCCCTCCGACATAGTCGCCGCCGTCACCAGAAGCTCTCGTTTCCTCCGTGTAAGCCTCGAGAAACATATTATCCCTGCTTTTCAGTTGGTGGCATTGGCAACAGCAGCAAAAGCAAAATTACTTCTTCGTGAGCTAAAAACCGTTAAAGCGGATTTAGCATTTGCTAAAGCGCGCTGTGCTCAACTTGAAGAAGAAAATAAATTACTCAGGGAACGAGAAGGAAGCGATAAGGGACTTATCCGTGATGATGATGATCTGGTATTAATCAATTATGATGCTAAACCCAGCTTTACACAGATCTTGGTAATCTCATCTATTGGGTTGATATTTTTCATAGCATTGCGTTATCATCTCAAAAAGATTCGAGATCAAAAGATCATTCCGCGTTTAAGATTATCGCGTGCAGGTCACCCCCCAAAGCTTGAAAGATTCTCTCATTACGTATCTAGGCAAATGGGGTTCAAGGATAGGAGAATCGGTCCTGATATATGTAGATTGGCTTCTGAATACATAAGCAAATATGAAGGGTTTGAAGATGATATATATGCCTATTTTGAGAATGAACCAGATGCTGATTCACTTTATGTCAAGTTGGTGGAAGAGTTTGAGAGATGCATTCTTAGTTACTTTGGATTTCATTGGAACCATTGTGACATATTGATAAGTCAGGTTTTGAGCTCGGACATTTCTGAGCCAAAAAAGAAGCTAAAGAACATAGTTATGGCTGCTACTAGGGATCAAAGGTTCGAGAGAGTTGCCAAGAGTCTGAAGGTGGCTAGTGTTTTTAATACATTAGTGGGAGAGATGAAAGCGATGGGAGCATCAGGAAATGCCGTAGTCATTGAAGCAGATGCCTTCAAAGAATCAGATGTCATCTACAGGGCACTTCGCTCAACAGGTCATCATGACATGATTCGAACAGCCGAATTGGCGGAAAGAAAAAACACAGCTTTTGTAGATGTGTCTCCAGAAGAAACTGTGCAGAAGAATGCTTTTGAAAGATTTAAAGATGTTGATGAATCAAGTTCATTCAAGGAAGCCCGTGCTCTAGCTGAAGCTTCTCAAAATGGAGCTCCTTTTAACCAAGGATGGATAGGTGAAATATTCCGCTGCTTCTTTGGCTGCTCAAAGTCTATTGCTAAGATGGTAAGTAGCATAGTTTGTGCAGAAGGGTCACCAGAGGGCATAATCTCTACCGCTGACATTGATACAGATGTAACAACTGCACTAGTTTGTGCGAATGTAGATGATGGTGAGCTTCCTTTGGATTACAATCAAGGGAATACTGATGGAAGCCTTGATGAGAATCTGATTATTGAGTGTCTTGATCAGATACAGCCAATGCGAAAGCGTTCCAGAGACAGGCCTCGTAAGTCAGAAACTGATGATACAGACTGGCCAGAGAAGCCATTGCTGCTAACACAGGGACCAACCAAAAACAAGAGGTATCAGAACGGTCAAACTAGAGGTCCAGAGAGGCCTCCTAGGGTAATTCAAGATACTGAACAATGTGAAGATAAGTTAAAGAAAAAAGAAGAGAAGTTAAGGAAGAAAGAAGAGAAGTTGAAGAAAAAAGAAGAGGAGTTAATGAAAAAAGATCAAGCTAAGCTGCATGACCGTGAAGAGAAATTAAAGAAAAAAGATGAAGCTAAGTTGCATGACCGAGAAGAGAAATTAAAGAAAAAAGATGAAGCTAAGCTGCATGACCGTGAAGAGAAATTAAAGAAAAAAGATGAAGCTAAGTTGCATGATTGTGAAGAGAAATTAAAGAATGAAAATCAAGCTGGTCGTGGTCGAGGTCGTGGACGAGGTCGTGGTCGTGGTCAAGGTCAAGGGAGGGCTCCTAAGCCCAAGTTTGCACTGCAGGTGTATGAAGGGAAAAACAGAACCACTTGGAAGCAGTAA 2268 0.4211 MFHSHRLKAVVYLNHLSSTPKSHHLLHSLNPFSTTSDSFTLSYFTNNCGLSPQDALKASKRLRLTFTTPEKPNSVIAFFKTHGFSIPQIQSIILKNPQLILSNPTKTILPKFQFLASKGASPSDIVAAVTRSSRFLRVSLEKHIIPAFQLVALATAAKAKLLLRELKTVKADLAFAKARCAQLEEENKLLREREGSDKGLIRDDDDLVLINYDAKPSFTQILVISSIGLIFFIALRYHLKKIRDQKIIPRLRLSRAGHPPKLERFSHYVSRQMGFKDRRIGPDICRLASEYISKYEGFEDDIYAYFENEPDADSLYVKLVEEFERCILSYFGFHWNHCDILISQVLSSDISEPKKKLKNIVMAATRDQRFERVAKSLKVASVFNTLVGEMKAMGASGNAVVIEADAFKESDVIYRALRSTGHHDMIRTAELAERKNTAFVDVSPEETVQKNAFERFKDVDESSSFKEARALAEASQNGAPFNQGWIGEIFRCFFGCSKSIAKMVSSIVCAEGSPEGIISTADIDTDVTTALVCANVDDGELPLDYNQGNTDGSLDENLIIECLDQIQPMRKRSRDRPRKSETDDTDWPEKPLLLTQGPTKNKRYQNGQTRGPERPPRVIQDTEQCEDKLKKKEEKLRKKEEKLKKKEEELMKKDQAKLHDREEKLKKKDEAKLHDREEKLKKKDEAKLHDREEKLKKKDEAKLHDCEEKLKNENQAGRGRGRGRGRGRGQGQGRAPKPKFALQVYEGKNRTTWKQ 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02883 755 MobiDBLite consensus disorder prediction 640 720 - -
Vifa4g02883 755 Pfam mTERF 77 152 IPR003690 GO:0003690|GO:0006355
Vifa4g02883 755 Coils Coil 619 664 - -
Vifa4g02883 755 Coils Coil 159 193 - -
Vifa4g02883 755 Coils Coil 689 716 - -
Vifa4g02883 755 Gene3D Transcription termination factor 3, mitochondrial 40 199 IPR038538 -
Vifa4g02883 755 MobiDBLite consensus disorder prediction 640 755 - -
Vifa4g02883 755 MobiDBLite consensus disorder prediction 569 626 - -
Vifa4g02883 755 PANTHER UNCHARACTERIZED 395 435 IPR044802 -
Vifa4g02883 755 MobiDBLite consensus disorder prediction 569 588 - -
Vifa4g02883 755 SMART mt_12 126 158 IPR003690 GO:0003690|GO:0006355
Vifa4g02883 755 SMART mt_12 90 121 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02883 Vifa-Chr4 922971559 922977073 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vifa4g02883 mTERF 1.1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02883 - - gmx:121172610 321.627