Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02835 ATGTCTGGAGGTGAAACAAATCAAGTGAACATAGATGAAGAAACTGAGACAACAACAAAGGAGATTCTAGAGAAGAAGCTGAAAGATCGCAAGGTTTCATGGGCAAAACTTCGTCGTGTAGACTCTCTCAATTTGGAAGCTGGGAGAGTTTCTATGAATACAAATCATCATTCTAAGATTGGTTGGAGTGTGACTTTGAGTTTGGCATTTCAAAGTATAGGGATTGTGTATGGTGATATTGGTACATCACCACTTTATGTGTATGCAAGTACTTTCACGGATGGAATAAAAGACAAAGATGACATTCTTGGAGTTTTGTCTCTCATCATCTACACCATTGTTCTTATTCCCATGCTCAAATATGTTTTCATTGTTTTATGGGCTAATGACAATGGCAACGGTGGAGCTTTTGCACTATACTCGTTGATTTGTAGGCATATAAAAGTGAGTTTAGCACCCAATCAACAACCTGAGGACATGGAACTTTCTAATTACAAACTTGAAATTCCATCTTACAAGCAGAAAAGAGCAAATAAAATAAAGCAAATGATTGAGCATAGTCATTTTGCTAGAATTGTTCTCTTACTTCTGGCTATCATGGGAACTTCCATGGTTATAGGAGATGGCATTCTCACTCCTTCAATCTCAGTTCTTTCTGCTGTTAGTGGAATCAGTTCATCCCTAGGTCAAAATGCTGTCGTGGGAATTACTGTAGCAATTTTGGTGGTGTTATTTTCTATGCAACGGTTTGTTGACTACTTCAAAAGAAATGGTAAACATGGTTGGTTATCATTAGGTGGAGTCTTCTTATGTATAACAGGATCTGAGGCCATGTTTGCTGATTTAGGTCACTTTAATGTTAGAGCCATTCAAATAAGCTTTTCTTTTGTTACATTTCCTGCCATATTGACTGCATATGTTGGTCAGGCAGCATTTCTAAGAGTGTTTCCTGATAAAGTTTCCACCACTTTCTATGACAGTATACCAGACCCTTTGTACTGGCCTACATTTGTTGTTGCTATTGGTGCTGCTATTATTGCTAGCCAAGCTATGATTTCAGGAGCATTTTCCATTATATCACAAGCCCTAAGTCTAGGTTGCTTCCCTAGGGTTAGGGTTGTTCATACTTCAACTAAGCATGAAGGTCAAGTTTATATTCCAGAGATCAACTACATGTTCATGCTTGGATGTATTGTAGTTTGTGTTGCCTTCAAAACCACCGATAAGATTAGCCATGCATATGGTATTGCAGTTATTGGTGATATGATGATTACAACAACATTGGTTTCACTTATAATGCTTGTTATATGGAAGAAGAGTTTATGGATGGTTATCATTTTCTCTTGTGTATTTGGTTTTATTGAGATTCTTTATTTCACTTCTCAATTAACCAAGTTCACAGGAGGAGGGTATTTTCCAATTGTGCTAGCTTTGTTCTTGACAATGATTATGGGAATTTGGCATTATGTACACAAAGAAAGATACATGTTTGAACTCAAAAACAAAGTTTCTACTGAGTATTTGAAAGAGTTGGCTAATAATGCAGATGTGCATAGAGTTCCTGGAATTGGACTTCTATATTCCGAGCTCGTACAAGGAATTCCACCGATATTCCCCCACTTTGTTTCTAGTGTTCCGTCGATTCATTCTGTCGTTGTGTTTGTGTCTATCAAGACTGTTCCGGTTAGTAGAGTTGCGTCAGAAGAGAGGTTTTTGTTTCGACAAGTGGAGCCAAGAGAGTATAGAATTTTTCGATGCGTGGTGAGGCACGGTTACAAAGATGTACTTGAGGAGCCTGTGCAGTTTGAGTCACAATTAATACAAAATCTCAAGGGATTTATTCAACAAAACAATTTCATGCTTGATGTTAATGAAGGCACTACTACTGCTAATGTAGCAGCAGCAGCAAGTGAAGAATTAGTAGTGCCTATTTCTACTAATGAGAATGATCAAATGGAAGATGTGAAACCAAAATCTACTAATTCTTCTAGTAGAATCATTCCAAGTGTTGGTGTGTCTCATGTTTCATCAGATTCAATTAGATCATTACCTGGAAGTATGACAAAATCATCAAATTTCTATGCACCTATTATTCAAGGACCTGAAGAGGAAATTAAGTTTATAGACAAAGCAATGGAAAGAGGTGTGGTGTATATGATTGGTGAAGCTGAGGTAGTGGCTCATCCAAATTCTTCTATTTTGAATAAGATTGTTGTGAACTATGCTTATAGTTTCTTGAGGAAGAATTTTAGACAGGCAGAACAATCCATTGCAATCCCACGCAAGAGACTTCTCAAAGTTGGAATGACATATGAAATATAA 2322 0.3717 MSGGETNQVNIDEETETTTKEILEKKLKDRKVSWAKLRRVDSLNLEAGRVSMNTNHHSKIGWSVTLSLAFQSIGIVYGDIGTSPLYVYASTFTDGIKDKDDILGVLSLIIYTIVLIPMLKYVFIVLWANDNGNGGAFALYSLICRHIKVSLAPNQQPEDMELSNYKLEIPSYKQKRANKIKQMIEHSHFARIVLLLLAIMGTSMVIGDGILTPSISVLSAVSGISSSLGQNAVVGITVAILVVLFSMQRFVDYFKRNGKHGWLSLGGVFLCITGSEAMFADLGHFNVRAIQISFSFVTFPAILTAYVGQAAFLRVFPDKVSTTFYDSIPDPLYWPTFVVAIGAAIIASQAMISGAFSIISQALSLGCFPRVRVVHTSTKHEGQVYIPEINYMFMLGCIVVCVAFKTTDKISHAYGIAVIGDMMITTTLVSLIMLVIWKKSLWMVIIFSCVFGFIEILYFTSQLTKFTGGGYFPIVLALFLTMIMGIWHYVHKERYMFELKNKVSTEYLKELANNADVHRVPGIGLLYSELVQGIPPIFPHFVSSVPSIHSVVVFVSIKTVPVSRVASEERFLFRQVEPREYRIFRCVVRHGYKDVLEEPVQFESQLIQNLKGFIQQNNFMLDVNEGTTTANVAAAASEELVVPISTNENDQMEDVKPKSTNSSSRIIPSVGVSHVSSDSIRSLPGSMTKSSNFYAPIIQGPEEEIKFIDKAMERGVVYMIGEAEVVAHPNSSILNKIVVNYAYSFLRKNFRQAEQSIAIPRKRLLKVGMTYEI 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02835 773 Pfam K+ potassium transporter 251 594 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vifa4g02835 773 Pfam K+ potassium transporter 69 250 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vifa4g02835 773 NCBIfam potassium uptake protein 251 773 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vifa4g02835 773 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 251 772 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02835 Vifa-Chr4 907036426 907040207 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g02835 4 773 Inorganic Solute Cotransporters AT4G13420 54.335 0.0 882
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02835 K03549 - gmx:100814313 1104.35