Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02791 ATGGGAAGTGGTGTTTCGAGGCTGTGTTCTTGCTTAGAACCGGTTCACCGGACTAACCGAACCCAACAAAAAGACCATATATTCACTGCAAATGAACCGTTGGATGAAACCCTAGGTCATTCTTTCTGTTACGTTAGATCTTCACCTCGCTTTCTCTCTCCTTCTCACTCCGATCGCTTTCTCTCACCTTCTACTTCTCTTCGCTTCTCACCTACCCATGAATCTCTTCCTAAAACCCGACCCGATTTTCCCGAAACCTCTTTTAAAGCCATTTCTGGTGCTTCGGTTAGTGCGAATAGTTCGGTTCCCAAAACGGTTATTCAGTTAGAAGAAGAATCCTCCGCCGCTGTTGATTCTGGTTCCGGTGCTGCTCTTGGGAAGGGGATAATTCTCAATGGCTTTGAGAGTACGTCGTCGTTTTCTGCTCTTCCGCTTCAGCCTGTTCCCAGAGGCGGTGAGCTTTTCGAGGGGAGTGGTTTTTTTCTCTCCGGTCCGATTGAGAGCGGCACGCATTCCGGACCGATTAACGCAGGTTCTACGGTTGATTCGGGTGTTTCCGGTGGGAGGGATGTTCCTTTTTCGGCGCCGTTAGGGGGGATGTACCCGAGGAAGAGAGGTGTGTCGGGGTTTAGGAAGGCGTTTCAGCGAAAGGTGTCCGAGAAGAAGCGGCCGTGGGTGGTGCCGGTGTTGAACTTCGTTGGGAGGAAGGAGGTTCCGGGGAGTGAAGGGAAGGGGAAGCCTGTTGAGGCCAAGAGTGAGAGCAATGTGCAGTGGGCGCTAGGGAAAGCTGGAGAGGATCGGGTTCATGTGGTGGTTTCCGAGGAGCAAGGGTGGTTGTTCGTTGGGATTTATGATGGTTTCAATGGTCCTGATGCCCCGGAGTTTTTGATGGGTCATATGTACCGTGCTGTTCACAATGAGCTTCAGGGTTTGTTTTGGGAAGTTGAAGAACCGGTAGAGAGTCATAATCCTGTTGAGGAAAAAAACAAAAACAAACCGGAGGGAGAAAATTCAAGTGCTGGTTTGGTACAAAGGACTGAAACTGCTCCCGTGGCGGGAACGGAGAGTAGACGCCGTAGGCTGTGGGAATTTCTGGCTGAAGACCCTGAAGATGGACTTGATCTTTCTGGGTCTGATAGGTTTGCATTTTCTGTTGACGATGCACTTAGTGTTAGTAATAATACCAATGCAGGCTCCGCCGGAAGTAGACGGTGGCTGTTGCTGTCCAAACTGAAGAATGGTTTGTCTTCTAAGCAAAAAGAGGGTAATGGTAGGAAGTTGTTGCCGTGGAATTTAGGGAATGGGGAGGAGAAAGAAGATAAGACTGATGTGGAAAACAAGCCTTCTGCGTCTGGCATTGGTGGTGGGAGAAGACGGAAGCTGGGTCCAGTTGATCATGATTTGGTTTTGAATGCAATGTCTCGGGCGCTTCAAGTGACCGAGCTTGCATACTTGGATATGACCGATAAGCTTCTGGATACAAATCCTGAACTTGCTTTGATGGGTTCTTGTCTGTTGGTTGCTTTGATGAGGGACGAGGATGTGTATGTGATGAATGTTGGGGATAGTCGTGCAATTGTTGCACATTATGAGCCCAAGGAGGTTCAGGATACTTCCAATGTGGAATCTGCAAGCAAGGGAGGAGACGCTGGTGTTGGTTCGAGCACCGAGAGCATAGTTGAGGAGTCCTTAGCTTTAGATGGTACTCAAACCGAAGATGCAATCAAGTTGGGGAATCCGGGTCCTGCTCAAGAAATGAGGTTGGCGGCATTGCAGCTGTCTACTGACCACAGCACCAGCATTAAAGAAGAAATCATTAGAATTAAGAATGAGCATCCTGATGATCCCCATTGCATAGTCAATGATAGAGTTAAAGGTCGTCTTAAGGTCACCAGAGCATTTGGGGCTGGATCTTTGAAACTGCCAAAGTTGAATGCCGCAGTACTGGAAATGTTTCGTAATGATTACATTGGCACTGCTCCATATGTATCATGCATCCCTTCACTACGGCACCATAGATTATGTCCAAGGGATCAGTTCCTGATCCTCTCATCTGATGGCTTGTATCAATATCTAAACAATGACGAAGTTGTTTCTCAAGTTGAGAGCTTCATGGAAAAGTTTCCAGAAGGAGACCCTGCCCAGCATTTAATAGAAGAGCTGCTCCTCCGTGCAGCCAAGAAGGCTGGAATGGATTTTCATGAGTTGCTGGATATTCCGCAAGGAGATCGGAGGAAGTATCACGATGACGTTACTGTTATGGTGATATCACTTGAAGGAAGAATATGGAAATCGTCAGGGAAATATCTGTGA 2313 0.479 MGSGVSRLCSCLEPVHRTNRTQQKDHIFTANEPLDETLGHSFCYVRSSPRFLSPSHSDRFLSPSTSLRFSPTHESLPKTRPDFPETSFKAISGASVSANSSVPKTVIQLEEESSAAVDSGSGAALGKGIILNGFESTSSFSALPLQPVPRGGELFEGSGFFLSGPIESGTHSGPINAGSTVDSGVSGGRDVPFSAPLGGMYPRKRGVSGFRKAFQRKVSEKKRPWVVPVLNFVGRKEVPGSEGKGKPVEAKSESNVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMGHMYRAVHNELQGLFWEVEEPVESHNPVEEKNKNKPEGENSSAGLVQRTETAPVAGTESRRRRLWEFLAEDPEDGLDLSGSDRFAFSVDDALSVSNNTNAGSAGSRRWLLLSKLKNGLSSKQKEGNGRKLLPWNLGNGEEKEDKTDVENKPSASGIGGGRRRKLGPVDHDLVLNAMSRALQVTELAYLDMTDKLLDTNPELALMGSCLLVALMRDEDVYVMNVGDSRAIVAHYEPKEVQDTSNVESASKGGDAGVGSSTESIVEESLALDGTQTEDAIKLGNPGPAQEMRLAALQLSTDHSTSIKEEIIRIKNEHPDDPHCIVNDRVKGRLKVTRAFGAGSLKLPKLNAAVLEMFRNDYIGTAPYVSCIPSLRHHRLCPRDQFLILSSDGLYQYLNNDEVVSQVESFMEKFPEGDPAQHLIEELLLRAAKKAGMDFHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYL 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02791 770 MobiDBLite consensus disorder prediction 63 83 - -
Vifa4g02791 770 MobiDBLite consensus disorder prediction 335 351 - -
Vifa4g02791 770 MobiDBLite consensus disorder prediction 432 446 - -
Vifa4g02791 770 SUPERFAMILY PP2C-like 261 759 IPR036457 -
Vifa4g02791 770 SMART PP2C_4 249 756 IPR001932 -
Vifa4g02791 770 PANTHER PROTEIN PHOSPHATASE 2C 250 757 IPR015655 GO:0004722|GO:0006470
Vifa4g02791 770 Gene3D - 242 765 IPR036457 -
Vifa4g02791 770 MobiDBLite consensus disorder prediction 319 354 - -
Vifa4g02791 770 MobiDBLite consensus disorder prediction 534 555 - -
Vifa4g02791 770 MobiDBLite consensus disorder prediction 319 334 - -
Vifa4g02791 770 MobiDBLite consensus disorder prediction 416 459 - -
Vifa4g02791 770 MobiDBLite consensus disorder prediction 537 555 - -
Vifa4g02791 770 Pfam Protein phosphatase 2C 592 726 IPR001932 -
Vifa4g02791 770 CDD PP2Cc 465 758 IPR001932 -
Vifa4g02791 770 ProSiteProfiles PPM-type phosphatase domain profile. 249 758 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02791 Vifa-Chr4 883147849 883153226 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g02791 1 770 PP2C-type Phosphatase Gene Family AT2G35350 55.392 0.0 780
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02791 - - mtr:11415473 1250.73