Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02782 ATGGCTGCTACATCTGGGATAGCTGAAGAGGAAACACAAGTGTCTTCCAGTGACGAGAACAATCCGAGGCTGGATGTCTATGTATGGGACATGGATGAGACCCTTATACTACTCAATTCCTTGCTGAAATCGTCATATGCCGAGTCTTTTAACGGTCTGAAGGATGTGCGGAAAGGTGTTGAGCTTGGGAGGATGTGGGAAAATCTCATTCTGCAATTATGCGATGATAATTTCTTCTACGGCCAAATTGAGAATTACAATAAGCCGTTTCTTGATGTTATGTCCGAGTATGATGATGGGAGGGACCTATCAGATTATGACTTCAACACAGATGAATTAGGGCCACCACATGATGATGTCAACAAAAGGAAACTTGCATATAGGCATCGAGTTATAGCCCAAAGATACTTGCAGGGTTTACATAATATTTTAGATCATGAGACAATAAAAGCATGGGATGATTTGTATAGTAAAACTGATGAATATACTGACAAATGGCTTTCATCAGCAAGGGCCTTTTTGGAGGAATGTTCTGGTGAAAAGAAAGATGTGGTTTCTTCCACTGCTTATGGTAACACAAGCACGAACTCAACTAATGCAAAGCATCAGCGTGTAAATGTTCTGGTGACATCTGGATCGTTGATACCATCTCTTGTAAAATGCCTGCTCTTTCATCTCGACAGTGTAATAACACATGAAAATGTGTATAGTTCCTGGGATGTGGGGAAAACTCAATGTTTTCGATGGATCAAGGAGCGTTTCAACCATCCCAACGTTCGTTTTTGTGTGATTGGAGACGGATGGGAAGAATGTGAAGCTGCAGAAATTATGAGATGGCCATTTATTAAGATTGACCCACGGCCAGGAAAGCCTCATAGGTTCCCTGGTCTCACATCCAAAACAGTTGGCCACTATTTTTCTGTGGTGTATCCAAACAACAAGAATGATGAAGAATGA 957 0.4138 MAATSGIAEEETQVSSSDENNPRLDVYVWDMDETLILLNSLLKSSYAESFNGLKDVRKGVELGRMWENLILQLCDDNFFYGQIENYNKPFLDVMSEYDDGRDLSDYDFNTDELGPPHDDVNKRKLAYRHRVIAQRYLQGLHNILDHETIKAWDDLYSKTDEYTDKWLSSARAFLEECSGEKKDVVSSTAYGNTSTNSTNAKHQRVNVLVTSGSLIPSLVKCLLFHLDSVITHENVYSSWDVGKTQCFRWIKERFNHPNVRFCVIGDGWEECEAAEIMRWPFIKIDPRPGKPHRFPGLTSKTVGHYFSVVYPNNKNDEE 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02782 318 NCBIfam EYA conserved domain 25 302 IPR006545 GO:0007275
Vifa4g02782 318 Gene3D - 25 290 IPR038102 -
Vifa4g02782 318 FunFam Eyes absent homolog 25 294 - -
Vifa4g02782 318 SUPERFAMILY HAD-like 28 288 IPR036412 -
Vifa4g02782 318 PANTHER EYES ABSENT 15 306 IPR028472 GO:0004725
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g02782 24 316 Protein tyrosine phosphatase (PTP) family AT2G35320 61.775 8.00e-138 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02782 - - tpra:123881555 584.719