Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02741 ATGATCTCCACCCTCTCTCCCTCCGACTCTTTTCTCGACAACCCATTTTCCACCTTCTCCGGCAGTTTCCCGCCTTGGGATTTCCATGACCTAATTTCCGACGACCTCGAACCCACCACTCCCCTACCCATCACTTCAACCTCCGGTTCAGACGAACCGAACCAAACCCACGAGAAATGTAAACCGGACTCAGACGAACCGAACCAAACCCACGAGAAACGTAAACCGGACTCAGACGAACCGAACCACCGGGCCATAGTCATAGACGAGCGAAAGCGGAGACGCATGTTATCGAACCGGGAATCCGCCCGAAGATCACGGATGCGTAAACAACGTCACGTGGAGAATCTAAGGAACCAGTTGAACAAGTGTAGAATCGAAAACAAGGAACTCAAAAACCGGTTGCAATTCATTTTGTTTCACTATAACAGTTTACGAACCGAAAACGAATGGCTCCGGTCCGAGCGAACCGTGCTGAACCAAAGAATCAACTACTATACTCAAATTTTGGCTTACCAACAATTTCAACCTTTCTCCACTGCATGGACATGTAACACTACTACGGTGTAA 570 0.486 MISTLSPSDSFLDNPFSTFSGSFPPWDFHDLISDDLEPTTPLPITSTSGSDEPNQTHEKCKPDSDEPNQTHEKRKPDSDEPNHRAIVIDERKRRRMLSNRESARRSRMRKQRHVENLRNQLNKCRIENKELKNRLQFILFHYNSLRTENEWLRSERTVLNQRINYYTQILAYQQFQPFSTAWTCNTTTV 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02741 189 SUPERFAMILY Leucine zipper domain 91 139 IPR046347 GO:0003700|GO:0006355
Vifa4g02741 189 Coils Coil 100 134 - -
Vifa4g02741 189 PANTHER BZIP TRANSCRIPTION FACTOR 44 46 173 - -
Vifa4g02741 189 Pfam bZIP transcription factor 91 149 IPR004827 GO:0003700|GO:0006355
Vifa4g02741 189 Gene3D - 89 139 - -
Vifa4g02741 189 CDD bZIP_plant_GBF1 92 143 IPR045314 GO:0003700|GO:0006355
Vifa4g02741 189 MobiDBLite consensus disorder prediction 54 104 - -
Vifa4g02741 189 FunFam BZIP transcription factor 89 139 - -
Vifa4g02741 189 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 89 152 IPR004827 GO:0003700|GO:0006355
Vifa4g02741 189 MobiDBLite consensus disorder prediction 39 53 - -
Vifa4g02741 189 SMART brlzneu 87 151 IPR004827 GO:0003700|GO:0006355
Vifa4g02741 189 MobiDBLite consensus disorder prediction 32 112 - -
Vifa4g02741 189 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 94 109 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02741 Vifa-Chr4 853997022 853997591 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g02741 1 176 bZIP Transcription Factor Family AT2G22850 36.279 8.94e-32 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vifa4g02741 bZIP_1 2.1e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02741 - - ahf:112800711 195.667