Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02722 ATGAAAATTTTCACAACTTATTATAATTATCATTTGAACTTCTTTTTTATCATTTTATTATCATCATTTTCTCTTACAGCATTAACTCCACTTCCTAACAGAAGAAACCTACACCAACCGTTTTCGTTTCCGGTGAGTTCTGCTCCGCCGCCGGAGATATCACCTCCTCCGCCTCCGGATACAACTCCCTCCTCCCCCGACATTCCATTTTTTAATGAGTTAACGCCACCACCGCCTCCGGTGGAAAACAACCAGAATGTACCTTCTTCATCCTACAACGGTACGATTGCAAATCCGACGGCGACGAAACCTGCAGAGCCTGCTAAGAAAGTTGCGATTGCGGTTTCCGTTGCATTTTCGTTGTTTGTGATGTTCTCTGTAGTCGCTTTCTTTTTGTATAAGCAGAAAACTAAACCTTCACCGGAATCAGATAAAATGAAACTCGTCGGTGAGAATTCTCAAAGAGTTCTAGAAGATTCCACCATGGCTCCACAACAGCCTTCAAGTTTCCTCTACATTGGAACTGTTGTGGAACCTAACGGAACGTCTGTAGGTGTAGCTAACCCTCACAAGATTAACCGTTACCGGCCGAGTCCCGAGTTGCATCCATTGCCGCCTCTCACGAAGTCTCTCGTTGTGGACAGTCACTCGCCACCGGCGGTTTCCTCGTCGTCTTCGTCGGAGACGGAGTTTCATTCGCCGCAGGAGTCTTATTCTCTTAATCTCAGCCGTGAAAATAGCTATTACACACCGGTTTCGCGTCAGAGTTCTCTTGCTAACGGAAGCCCTACCGCGCCGGTTTCGCGTCAGAGTTCTCTTGCTAACGGAAGCCCTACCGCGCCGGTTTCGCGTCAGAGTTCTCTTGCAAACGGAAGCCCTACCGCGCCGGTTTCGGTTTCTCCGGTGGTTCCTTTTTCGAAGCGAACTTCTCCGAAATCTCGATTATCTGGTTCTTCGCCGGATATCAGACACGCGATGATACCTTCCATTAAGCAAGTTGAGAAAGAAGCGACGTTATGCGGTGGTGGTCCTTCTAGAAGACCAAAATTCTCATCGCCGCCACCAGCGCCTAATTTGACGCATCTTCATTCAAATGACCTAAGAGATTCACTTAGTTTACCTCCTCCACCTCCACCACCTCCGCCGCCGAGAAATTTCCGGTCGCCGATAGTTAGTGCTTCTCCTTCTTCTGCTTCACGAAAGTATCAATGGACTCAGCCACGAAGTCATGGAGAGGATTCTGCATCTGGTAACAGTTTGAGTGTCAAGAAAGTTTCCAAGGAAGACGATGAAATTGAAATGGATGGAGGAAAACCTAAGTTGAAACCTCTGCATTGGGATAAAGTGCGTGCTACTTCAGATCGTGCTACTGTATGGGACCAATTAAAATCGAGCTCATTTCAGTTAAACGAGGACATGATGGAGACTCTGTTTGGTTTTAATTCATTGAATTCTGCACCTAAACCTAAAGAAATGTCTGTTAACAGAAAACCAGTTTTTGCTGCGGTTGTGCAAGAGAATAGGGTGTTAGATCCAAAGAAATCCCAAAACATAGCTATACTACTCAGGGCATTGAATGTCACAAGAGATGAGGTTTCTGAAGCTCTTTTAGACGGGAATCCTGAAGGTTTGGGTGCTGAGTTATTGGAAACTCTAGTGAAGATGGCTCCAACGAAGGAGGAGGAAATAAAACTAAAACATTGTGACGGTGATCTTTCAAAACTTGGGCCTGCAGAAAGATTTCTTAAAGCAGTGCTTGATGTCCCTTTAGCTTTCAAAAGAGTTGAAGCCATGCTATACAGAGCTAACTTTGAAACAGAAGTTAACTACCTTAAGAAATCCTTTCAAACCCTGGAGGCAGCAAGTGAGGAACTAAAGAACAGCCGGTTATTCCTCAAACTCCTTGAAGCTGTTCTCAGGACAGGAAACAGAATGAATGTTGGAACCAATCGCGGTGATGCTAAATCTTTCAAACTAGATACACTACTGAAACTTGCAGATATAAAAGGAACTGATGGAAAGACCACATTGCTCCATTTTGTTGTTCAAGAAATTATTAGATCTGAAGGTACAGGCGATGAATCTGCAAATGAGAATGTTCAAAACCAAACGAATTCCCAGTTCAACGAGGATGAGTTCAAAAAGAAAGGATTACAGGTTGTGGCTGGATTGAGTAGAGACTTTGGTAATGTAAAAAAGGCAGCAGGAATGGACTCAGATGTCTTAAGCAATATGCAAGGGAACTTCTTTAACTCTACAGAGATATTTATGAAAGATGCTGAAGAGAAAATATTAAGGATCAAAGCTGATGAGATAAGGGCCTTATTCCTTGTGAAAGAAGTTACAGAATACTTTCATGGGGATACCACAAAGGAAGAAGCCCACCCTTTCAGAATTTTTACGATTGTAAGAGACTTCCTAAATATTTTGGATCAAGTTTGCAAAGAAGTGGGAAAGATGCAGGATAGAACTGCAACCAGTTCATCCAGATCGTTTAGGATAGCCGCAAGTGCATCGCTACCTGTTCTCAACAGGTACCGTGCAAGACAAGATACAAGTTCAGATGAGGAAAGTTTATCACCCTAG 2586 0.4377 MKIFTTYYNYHLNFFFIILLSSFSLTALTPLPNRRNLHQPFSFPVSSAPPPEISPPPPPDTTPSSPDIPFFNELTPPPPPVENNQNVPSSSYNGTIANPTATKPAEPAKKVAIAVSVAFSLFVMFSVVAFFLYKQKTKPSPESDKMKLVGENSQRVLEDSTMAPQQPSSFLYIGTVVEPNGTSVGVANPHKINRYRPSPELHPLPPLTKSLVVDSHSPPAVSSSSSSETEFHSPQESYSLNLSRENSYYTPVSRQSSLANGSPTAPVSRQSSLANGSPTAPVSRQSSLANGSPTAPVSVSPVVPFSKRTSPKSRLSGSSPDIRHAMIPSIKQVEKEATLCGGGPSRRPKFSSPPPAPNLTHLHSNDLRDSLSLPPPPPPPPPPRNFRSPIVSASPSSASRKYQWTQPRSHGEDSASGNSLSVKKVSKEDDEIEMDGGKPKLKPLHWDKVRATSDRATVWDQLKSSSFQLNEDMMETLFGFNSLNSAPKPKEMSVNRKPVFAAVVQENRVLDPKKSQNIAILLRALNVTRDEVSEALLDGNPEGLGAELLETLVKMAPTKEEEIKLKHCDGDLSKLGPAERFLKAVLDVPLAFKRVEAMLYRANFETEVNYLKKSFQTLEAASEELKNSRLFLKLLEAVLRTGNRMNVGTNRGDAKSFKLDTLLKLADIKGTDGKTTLLHFVVQEIIRSEGTGDESANENVQNQTNSQFNEDEFKKKGLQVVAGLSRDFGNVKKAAGMDSDVLSNMQGNFFNSTEIFMKDAEEKILRIKADEIRALFLVKEVTEYFHGDTTKEEAHPFRIFTIVRDFLNILDQVCKEVGKMQDRTATSSSRSFRIAASASLPVLNRYRARQDTSSDEESLSP 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02722 861 MobiDBLite consensus disorder prediction 423 439 - -
Vifa4g02722 861 Pfam Formin Homology 2 Domain 437 744 IPR015425 -
Vifa4g02722 861 Gene3D Formin, FH2 domain 436 822 IPR042201 -
Vifa4g02722 861 SUPERFAMILY Formin homology 2 domain (FH2 domain) 374 824 - -
Vifa4g02722 861 SMART it6_source 428 825 IPR015425 -
Vifa4g02722 861 MobiDBLite consensus disorder prediction 85 100 - -
Vifa4g02722 861 MobiDBLite consensus disorder prediction 215 317 - -
Vifa4g02722 861 PANTHER FORMIN-RELATED 16 855 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Vifa4g02722 861 ProSiteProfiles Formin homology-2 (FH2) domain profile. 431 836 IPR015425 -
Vifa4g02722 861 MobiDBLite consensus disorder prediction 371 388 - -
Vifa4g02722 861 MobiDBLite consensus disorder prediction 45 84 - -
Vifa4g02722 861 MobiDBLite consensus disorder prediction 45 101 - -
Vifa4g02722 861 MobiDBLite consensus disorder prediction 188 439 - -
Vifa4g02722 861 MobiDBLite consensus disorder prediction 389 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02722 Vifa-Chr4 846537963 846541866 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g02722 438 841 FH2 protein (formin) Gene Family AT3G25500 60.789 5.56e-162 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02722 - - gmx:100803578 888.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g02722 4 846537963 846541866 Vifa4g02722 4 846537963 846541866 ECH
Vifa1g07415 1 1142987423 1142991295 Vifa4g02722 4 846537963 846541866 PCT