Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02720 ATGGGTGAAGAAATTTTGAGTAGTGCGGTGGTTGTTAGTGTGAGAGAGTTTGATCCAAATAAAGATAGAGAAAGTGTTGAAGCAGTTGAAAAAATATGTGAAGTTGGTCCCAGTGGAAAACTTTCCCTCTTCACCGACTTGCACGGTGACCCTATTTGCAGGGTCCGCAACTCACCAACTTTCCTTATGCTGGTAGCTGAAATAGACAATGAGACAGTCGGAATGATTCGAGGTTGCATCAAAACCGTTACATGTGGGAAGAAGATCATCAGACAAACCAAGAGTGCTGAATCAATTTCCAATCATGTCCCTGTGTTTACCAAACTCGCTTACGTGTTAGGCCTTCGAGTTTCTCCGAATCATAGAAGAATGGGGATAGGGTTAAAACTGGTACAAAAAATGGAAGAATGGTTCAGAGAGAATGGTGCTGAGTATTCCTACATGGCAACAGAAAACGACAACGTTGCATCAGTTAAGCTTTTCACCGATAAATGCGGTTACTCGAAGTTTCGTACACCGTCGATTCTCGTGAACCCGGTTTTCGCGCACCGTGTGAAAACGTCGTCGAAAGTAACCGTTATTAAGCTTGCACCAAACGACGCCGAATTGATTTACCGTAACAAATTCTCCACTACAGAGTTTTTTCCTCGTGACATTGATTCTGTTTTGAAAAACAAACTCACTCTCGGAACTTTTCTCGCTGTTCCGTGTAACGGAAAATATGGGCCTGGGCCTGGGCCTGAGAATTGGGCCGGGTCGGAGGCTTTTTTATTGGATCCACCTAGTTCTTGGGCTTTATTAAGTGTTTGGAATTGTAAAGACTTGTTTACTCTTGAGGTGAAAGGCGCGTCGCGCGTGAGACGCGTGTTGGCTAAAACAACTCGCGTGATAGACAAGGCTTTTCCGTGGTTACGGTTACCTTCGATTCCGAATTTTTTTGAACCGTTTGGGTTTCATTTAATGTATGGGATTGGTGGCGAAGGACCTGAAGCATTGAAGATGGTGAAATCTTTGTGTGGTGTTGCTCATAATCTTGCTATGGAAAATGGTTGCAGTGCAGTTGCTACTGAAGTTTCTAGCTGCGAGCCGTTACGGTTTGCGATTCCTCATTGGAAGGTTTTGTCATGTGAAGAGGATTTGTGGTGTATTAAGAGACTCGGTGAAGATTATAGTGATGGTTCTGTTGGTGATTGGACTAAATCTCCACCTGGGTTTTCCATTTTTGTTGATCCCAGAGAGTTTTAA 1245 0.4361 MGEEILSSAVVVSVREFDPNKDRESVEAVEKICEVGPSGKLSLFTDLHGDPICRVRNSPTFLMLVAEIDNETVGMIRGCIKTVTCGKKIIRQTKSAESISNHVPVFTKLAYVLGLRVSPNHRRMGIGLKLVQKMEEWFRENGAEYSYMATENDNVASVKLFTDKCGYSKFRTPSILVNPVFAHRVKTSSKVTVIKLAPNDAELIYRNKFSTTEFFPRDIDSVLKNKLTLGTFLAVPCNGKYGPGPGPENWAGSEAFLLDPPSSWALLSVWNCKDLFTLEVKGASRVRRVLAKTTRVIDKAFPWLRLPSIPNFFEPFGFHLMYGIGGEGPEALKMVKSLCGVAHNLAMENGCSAVATEVSSCEPLRFAIPHWKVLSCEEDLWCIKRLGEDYSDGSVGDWTKSPPGFSIFVDPREF 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02720 414 Pfam Acetyltransferase (GNAT) family 58 167 IPR000182 GO:0016747
Vifa4g02720 414 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 12 186 IPR000182 GO:0016747
Vifa4g02720 414 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 11 414 - -
Vifa4g02720 414 CDD NAT_SF 63 145 - -
Vifa4g02720 414 Gene3D - 47 173 - -
Vifa4g02720 414 FunFam Probable N-acetyltransferase HLS1-like 21 174 - -
Vifa4g02720 414 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 53 169 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02720 Vifa-Chr4 845383049 845384390 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vifa4g02720 Acetyltransf_1 2.5e-18 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02720 - - gmx:100775317 674.47