Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02713 ATGACGCAATTCACACCTTCACTACCTTATATGCTTTCAAACCCTTCTTCTTCCATGAACAAAAACAGTCAAATACCAACTAAACCATGGTTCCCAACTTCCAAAGCCTTATCAACCTTTGGTGACACCAATTGCATGGAACAGTTACTTGTTCATTGCGCTAACGCAATCGAAACCAACGATGTAACACTTGCTCAACAAATCCTTTGGGTTCTCAACAACATAGCACCGCAAGACGGCGATTCAAATCAACGCTTAGCTTATAGTTTCCTTAGAGCTCTTACACATCGCGCAGCCAAAACTGGTACCTGCAAAATGCTAGTAGAACAAGTTTGTTCAACTGCTCATAACACTCTTACAGTAGATACGCACAGATTCTCAGTCATTGAACTAGCTAATTTTGTTGATTTAACACCTTGGCATCGATTCGGTTTCGCAGCCGCTAATGCAGCCATTCTTGAAGCAACGGAAGGTTTCTCGGTTATTCATATAGTTGATTTGAGTTCAACTCATTGCATGCAGATTCCAACATTAATCGATGCTATCGCTAATCGCCACGAAGTTGCTCCTTTAATCAAACTCACTGTTTCTGATCATGCTTGTAGCACTGATCATGAACTTCCACCTAAACTTGATCTTTCTTATGAAGAATTAGGATCTAAGTTGGTGAATTTCGCTAGGTCGAGAAATGTAACATTGGAATTCAGAGTAGTTTCTTCAAGTTACACAAATGGTTTTGCTTCTTTGATTGAACATTTGAGAGTTCAACGTTTAGTTTATTCAGGTGAAGCTTTGGTTATTAACTGTCACATGATGCTTCATTATATTCCAGATGAAACCCTATCAAATTCAAACTCTTATCTTTATGATTCTATATCTTCTTCTTCTGTTGCGACGACGACGACGACGACTACTACTACTAGTACTACTTCTCTAAGATCGTTGTTTCTTCAGGCGCTTCGAGGTTTAGATCCAACACTAGTTGTTTTAGTAGATGAAGATGTTGATTTAACTTCAAGCAACTTGGTTACTAGATTAAGGTCAGCATTTAACTATCTATGGATACCTTATGATACGGTGGACACTTTTCTGCCGCGCGGAAGCAAACAAAGGCAATGGTATGAAGGTGATATTTGTTGGAAGATTGAGAATGTGATAGCTCATGAAGGTGTTCAAAGAGTAGAGAGAGTTGAGCCTATAGGAAAATGGGAACAAAGAATGAGAAATGCGAATTTTCAAGGGATTGGATTTGGTGAGGAATGTGTTGGTGAAGTCAAAGCTATGCTTGATGAACATGCTGCTGGATGGGGATTGAAGAAAGAAGATGAATGTATTGTGCTTACATGGAAAGGTCATAATGTTGTGTTTGCTTCTGCTTGGTTGAATGCTTAA 1392 0.3908 MTQFTPSLPYMLSNPSSSMNKNSQIPTKPWFPTSKALSTFGDTNCMEQLLVHCANAIETNDVTLAQQILWVLNNIAPQDGDSNQRLAYSFLRALTHRAAKTGTCKMLVEQVCSTAHNTLTVDTHRFSVIELANFVDLTPWHRFGFAAANAAILEATEGFSVIHIVDLSSTHCMQIPTLIDAIANRHEVAPLIKLTVSDHACSTDHELPPKLDLSYEELGSKLVNFARSRNVTLEFRVVSSSYTNGFASLIEHLRVQRLVYSGEALVINCHMMLHYIPDETLSNSNSYLYDSISSSSVATTTTTTTTTSTTSLRSLFLQALRGLDPTLVVLVDEDVDLTSSNLVTRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEGDICWKIENVIAHEGVQRVERVEPIGKWEQRMRNANFQGIGFGEECVGEVKAMLDEHAAGWGLKKEDECIVLTWKGHNVVFASAWLNA 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02713 463 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 45 450 IPR005202 -
Vifa4g02713 463 Pfam GRAS domain family 46 460 IPR005202 -
Vifa4g02713 463 ProSiteProfiles GRAS family profile. 37 461 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02713 Vifa-Chr4 838890404 838891795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g02713 26 461 GRAS Transcription Factor Family AT3G49950 56.818 4.75e-172 488
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vifa4g02713 GRAS 2.9e-92 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02713 - - cam:101509453 748.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g02713 4 838890404 838891795 Vifa4g02713 4 838890404 838891795 ECH