Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02711 ATGGGTCGGTTTAGTGTTATACTCGTGTTGTCATTTGCGTTAGCATTGTGTCTTGTTCCTTATACTAGTTTTGCTCAGCTTAGTCCGAACCATTACGCTAACATTTGTCCAAATGTTCAGTCCATTGTCAGATCAGCTGTTCAAAAGAAATTTCAACAGACCTTTGTAACCATTCCTGCTACTCTCCGTCTCTTCTTTCACGATTGTTTTGTTCAGGGTTGTGATGGTTCGGTTTTGGTGGCGTCGAGTGGAGGTAACCAAGCGGAGAAGGATAACGCTGATAATTTGTCATTGGCTGGTGATGGATTTGATACCGTTATTAAAGCGAAAGCGGCGTTAGATGCTGTTCCACAGTGTAGAAACAAAGTTTCTTGTGCTGATATTCTTGCTTTGGCTGCTAGAGATGTTGTTAATCTGGCTGGTGGACCGTCTTATACGGTTGAATTGGGAAGATTTGATGGGTTGGTTTCAAGATCTTCAGATGTAAATGGGAGATTGCCTCAGCCAGGGTTCAATTTGAACCAGCTGAATGCTCTGTTTGCTAGCAATGGACTCACTCAAACAGACATGATTGCCCTATCAGGTGCACACACCCTTGGATTCTCTCACTGCGACAGATTCTCCAATAGGATCCAAAATCCAATCGACCCAACATTGAACAGACAATACGCAATCCAGTTACAACAACAGTGTCCTAGAAACGTTGATCCAAGAATAGCCATCAACATGGACCCAACAACTCCAAGAACATTCGACAATATTTATTACCAGAATCTTCAACAGGGAAAAGGTTTATTCACTTCAGACCAAATCCTCTTCACTGACACAAGATCTAGGGCAACGGTTAACTCTTTTGCTTCTAGTGGTAACGTTTTCAACTCCAATTTTATTAGTGCTATGACTAAGTTGGGTCGTGTTGGTGTTAAAACTGCGAGGAATGGCAAGATTCGTACTGATTGTTCTGTGCTTTGA 972 0.4218 MGRFSVILVLSFALALCLVPYTSFAQLSPNHYANICPNVQSIVRSAVQKKFQQTFVTIPATLRLFFHDCFVQGCDGSVLVASSGGNQAEKDNADNLSLAGDGFDTVIKAKAALDAVPQCRNKVSCADILALAARDVVNLAGGPSYTVELGRFDGLVSRSSDVNGRLPQPGFNLNQLNALFASNGLTQTDMIALSGAHTLGFSHCDRFSNRIQNPIDPTLNRQYAIQLQQQCPRNVDPRIAINMDPTTPRTFDNIYYQNLQQGKGLFTSDQILFTDTRSRATVNSFASSGNVFNSNFISAMTKLGRVGVKTARNGKIRTDCSVL 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02711 323 SUPERFAMILY Heme-dependent peroxidases 26 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vifa4g02711 323 Gene3D - 30 322 - -
Vifa4g02711 323 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa4g02711 323 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa4g02711 323 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa4g02711 323 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa4g02711 323 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa4g02711 323 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa4g02711 323 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa4g02711 323 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa4g02711 323 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa4g02711 323 FunFam Peroxidase 167 303 - -
Vifa4g02711 323 PANTHER - 9 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa4g02711 323 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa4g02711 323 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa4g02711 323 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa4g02711 323 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa4g02711 323 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa4g02711 323 CDD secretory_peroxidase 26 322 IPR033905 GO:0004601|GO:0042744
Vifa4g02711 323 ProSiteProfiles Plant heme peroxidase family profile. 26 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa4g02711 323 Pfam Peroxidase 43 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa4g02711 323 Gene3D Peroxidase, domain 2 167 303 - -
Vifa4g02711 323 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Vifa4g02711 323 FunFam Peroxidase 30 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02711 Vifa-Chr4 838133757 838136088 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g02711 1 320 Peroxidase AT5G67400 66.462 2.67e-162 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02711 K00430 - gmx:100817540 539.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g02711 4 838133757 838136088 Vifa1g07387 1 1137337611 1137339385 PCT