Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02700 ATGGTGTTCTCCTTGGTCCTCTTAGTTCTGTTATTTAGTTTCAGCGACGCTTCTTCTTCCTTGAAGAGCACTTACATAGTGCACATGGCGAAATCTGAAATGCCAGAGAGTTACGAGCATCATACTGTATGGTATGAATCGTCTTTACAATCTGTTTCCGAGTCAGCTGAAATGATGTATACATATGAAAACGCGGTTCATGGATTCTCAACCAGATTAACTTCCGAAGAAGCTCGTTTGCTTGAGAGGCAAACGGGGATTCTCGCGGTGTTGCCGGAAGTGAAATACGAGCTTCACACGACAAGGACTCCTCAGTTTCTTGGTCTTGATAAAAGCGCAGAGATGTTTCCGGAATCAAGCTTAGCAAGCGAGGTTGTTGTCGGAGTTTTAGATACCGGTATTTGGCCCGAAAGCAAAAGCTTCGACGATACTGGATTTGGACCTATACCCACAACATGGAAAGGCGCGTGTGAAACAGGTCCTATTGATGAAACCACAGAGTCCAAATCTCCGAGAGACGACGACGGGCATGGTACTCATACTTCAACTACTGCAGCAGGTTCGGTTGTCACCGGTGCTAGCCTCTTCGGTTACGCTGCAGGGACGGCGCGTGGGATGGCCACACGCGCTAGAGTTGCTGCATACAAGGTTTGTTGGAAAGGTGGTTGTTTTAGCTCCGACATATTAGCTGCTATTGATAAAGCTATTTCCGACGGTGTTAATGTTCTGTCTCTTTCTCTCGGTGGTGGAATGTCGGATTATTTTAGAGACAGTGTCGCTATAGGTTCTTTTGCGGCGATGGAGAAAGGGATTTTAATCTCTTGCTCCGCTGGAAATGCTGGTCCAAGTGCTTATTCTCTGTCTAATGTAGCTCCATGGATTACTACCGTGGGTGCTGGTACACTGGATCGTGACTTCCCTGCGTTAGTTAGTCTCGGTAACGGACTTAACTACTCCGGTGTTTCTCTTTATCGAGGAAACGCTTTACCGGATTCTCCATTACCGTTGATTTACGCAGGGAATGCTACTAATGCTACCAACGGGAATTTGTGTATGACCGGAACTTTATCACCGGAGTTAGTTGCTGGGAAGATTGTTTTTTGTGACCGTGGGATGAATGCCAGGGTTCAGAAAGGAGCTGTGGTGAAAGCCGCTGGAGGTTTAGGTATGGTTCTGGCCAACACCGCCGCAAACGGGGAGGAGCTTGTGGCTGACACACATCTATTACCAGCCACGGCGGTTGGTGAAAAAGCCGGCAATGCAATCAAGAAATACTTATTCTCCGACGCAAAACCAACGGTGAAGATCGTTTTCGAAGGAACAAAAGTGAATGTTCAGCCATCTCCGGTGGTGGCAGCTTTCAGTTCACGAGGTCCCAACTCAATCACACCGCAGATCTTGAAACCCGATCTTATTGCGCCAGGTGTCAACATCTTAGCGGGGTGGTCAAAGGCAGTGGGTCCCACCGGGTTACCAGTAGACGAGAGACGCGTTGATTTCAACATTATCTCTGGTACCTCCATGTCCTGTCCCCACGTGAGTGGTTTAGCTGCTTTGATTAAGTCGGCTCATCCTGAATGGAGCCCAGCCGCTGTTAGATCGGCTCTCATGACAACGGCTTACACGGCTTACAAGGACGGTAAAAACATACAAGACAGTGCTACTGGAAAACCTTCAACACCGTTTGATCATGGATCTGGACACGTGGACCCTATCGCTGCACTTGATCCTGGACTTGTTTATGATTTAACGGTGGAAGATTATTTAGGTTTTCTCTGTGCGTTAAACTATACATCCACTCAAATCACTGCTTTAGCGAAGAGAAAATTCGAGTGTGACGCGGGCAAAAAATACAGTGTGAATGATCTTAATTACCCATCATTTGCGGTTGTTTTTGACACCATGGGTGGGGCCAACGTTGTAAAGCACACGAGAATCCTTACCAACGTAGGACCCGCAGGAACATACAAGGCTTCAGTGATATCAGATTCAAAAACCGTGAAAATAACGGTTGAACCGGAGGAGTTAATTTTCAAGGAAAATGATAAGAAACCTTATACGGTGACGTTTGCGTCATTGGGTTCTACACCGCAGAAGTTGAATGGTTTTGGACGGTTGGAATGGAGGAATGAGAAGAACGTAGTTGGAAGCCCAATTTCGATTAGTTGGGGTTGA 2175 0.469 MVFSLVLLVLLFSFSDASSSLKSTYIVHMAKSEMPESYEHHTVWYESSLQSVSESAEMMYTYENAVHGFSTRLTSEEARLLERQTGILAVLPEVKYELHTTRTPQFLGLDKSAEMFPESSLASEVVVGVLDTGIWPESKSFDDTGFGPIPTTWKGACETGPIDETTESKSPRDDDGHGTHTSTTAAGSVVTGASLFGYAAGTARGMATRARVAAYKVCWKGGCFSSDILAAIDKAISDGVNVLSLSLGGGMSDYFRDSVAIGSFAAMEKGILISCSAGNAGPSAYSLSNVAPWITTVGAGTLDRDFPALVSLGNGLNYSGVSLYRGNALPDSPLPLIYAGNATNATNGNLCMTGTLSPELVAGKIVFCDRGMNARVQKGAVVKAAGGLGMVLANTAANGEELVADTHLLPATAVGEKAGNAIKKYLFSDAKPTVKIVFEGTKVNVQPSPVVAAFSSRGPNSITPQILKPDLIAPGVNILAGWSKAVGPTGLPVDERRVDFNIISGTSMSCPHVSGLAALIKSAHPEWSPAAVRSALMTTAYTAYKDGKNIQDSATGKPSTPFDHGSGHVDPIAALDPGLVYDLTVEDYLGFLCALNYTSTQITALAKRKFECDAGKKYSVNDLNYPSFAVVFDTMGGANVVKHTRILTNVGPAGTYKASVISDSKTVKITVEPEELIFKENDKKPYTVTFASLGSTPQKLNGFGRLEWRNEKNVVGSPISISWG 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02700 724 CDD PA_subtilisin_like 310 436 - -
Vifa4g02700 724 Pfam PA domain 349 422 IPR003137 -
Vifa4g02700 724 PRINTS Subtilisin serine protease family (S8) signature 122 141 IPR015500 -
Vifa4g02700 724 PRINTS Subtilisin serine protease family (S8) signature 173 186 IPR015500 -
Vifa4g02700 724 PRINTS Subtilisin serine protease family (S8) signature 504 520 IPR015500 -
Vifa4g02700 724 SUPERFAMILY Subtilisin-like 98 579 IPR036852 GO:0004252|GO:0006508
Vifa4g02700 724 Gene3D Peptidase S8/S53 domain 125 588 IPR036852 GO:0004252|GO:0006508
Vifa4g02700 724 Pfam Fibronectin type-III domain 622 721 IPR041469 -
Vifa4g02700 724 MobiDBLite consensus disorder prediction 156 184 - -
Vifa4g02700 724 MobiDBLite consensus disorder prediction 165 179 - -
Vifa4g02700 724 FunFam Subtilisin-like protease SBT1.9 13 99 - -
Vifa4g02700 724 Gene3D - 592 723 - -
Vifa4g02700 724 CDD Peptidases_S8_3 96 541 IPR034197 -
Vifa4g02700 724 ProSiteProfiles Serine proteases, subtilase domain profile. 95 575 - -
Vifa4g02700 724 FunFam subtilisin-like protease SBT1.5 303 443 - -
Vifa4g02700 724 Pfam Peptidase inhibitor I9 24 99 IPR010259 -
Vifa4g02700 724 Pfam Subtilase family 123 552 IPR000209 GO:0006508|GO:0008236
Vifa4g02700 724 ProSitePatterns Serine proteases, subtilase family, serine active site. 505 515 IPR023828 -
Vifa4g02700 724 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 25 720 IPR045051 -
Vifa4g02700 724 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 13 99 IPR037045 -
Vifa4g02700 724 Gene3D - 303 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02700 Vifa-Chr4 833600670 833602925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g02700 5 723 Subtilisin-like Serine Gene Family AT5G67360 69.652 0.0 1057
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02700 - - gmx:100815413 1126.69