Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02673 ATGTATTACATCATCCTTGCTATTATTTTCCTTATAACACTAAAATTTGTATTAATCTCAACAAAAAGACTCAAAAACCTTCCACCAGGTCCACTGAGTATTCCCATAATAGGAAACATTTACCAACTCAAACACCCTCTTCACCGCACTCTCCACAATCTCTCCCTAAAATACGGTCAAGTTTTCTCCCTACGGTTCGGTTCTCGTTTAGTCGTTGTCGTTTCATCACCTTCAGTCGTACACGAATGTTTCACCAAAAACGACACCGTTTTAGCAAACCGTCCGCCTCTTCTCGCCGGCAAACACTTAGGCTATAACTACACCGCTGTTACGGCTGCACCTTACGGTGATCACTGGCGTAACGTCCGCCGTATAATCTCCCTCGAGATACTCTCGTCTCACCGGTTAAATTCCTTTTCAGGAATCAGAAAAAATGAAATCAAGAAACTCATGCAAAACCTAGCTCGTGATTGTGGAGATGGTTTTGCAAAAGTGGAACTGAAGTTGAAGTTTTCGGAGATGACTTTTAACATGATAATGAGAATGATAGCTGGAAAAAGGTATTATGGAGAGGATTGTGATGTCAGTGACGAGGAAGAAGCGAAGAGATTTAGGGAGGTGATTACGGAGTTTATATCGGTGGGAGGATCGAGTAATCCTAGTGAATTTGTTTGGATTTTTAGGTTGTTTGATTTTGGTAGTTATGAGAAGAGGTTGAAGAGGATTAGTAGAAGATTTGATGGGTTCTTGCAGGGACTAGTTGATGAACATCGAAGAAAGAACAAGAATGAGAATACCATGATTGATCATCTCTTGAACTTGCAAGAATCACAGCCAGAGTATTATACGGATCAAATCATCAAAGGGATTGTTCTTGTTATGATCCTTGGAGGAACAGAAACGTCAGCTACAACTTTAGAATGGGCAATGTCTGCATTACTAAATCATCCAGAAGTGTTGAAGAAGGCTAAAGATGAAATCGATACCAACATAGGACAAGATCACTTAGTAGAAGAGTCAGACATTTCAAAACTCCCTTACCTTCAAAATATAATCCACGAGACATTTCGATTGCACCCCGCATTTGCATTACTGGCACCTCATTTTTCTTCAGAAGATTGTTCCATAGGAGGTTATAATGTTCCAAAGGGTACTATTTTATTGGTTAATGCTTGGGCAATTCATAGAGATTTTCAACTATGGAGTGATCCTACACAGTTCAAGCCGGAGAGATTTGAGAAAGAAGGGGAAGCAGAAAAGTTGATACCATTTGGATTGGGAAGAAGGGCTTGTCCTGGAGCAAACTTGGGGCAGCGTACAGTAAGTTTAACACTGGCTCTATGTATTCAATGTTTTGATTGGAAAAGAATAAGTGAGAAAGAAATTGATATGACTGAAGGAAAAGGGGCCACTACACCGAAGCTAATTCCCTTAGAAGCCATGTGTAAAGCTCGTTTTAATGTCATCAACAAGGTTTTTCTTGAAGAAGATGAAAACACGTCCATGGAGTAA 1512 0.4001 MYYIILAIIFLITLKFVLISTKRLKNLPPGPLSIPIIGNIYQLKHPLHRTLHNLSLKYGQVFSLRFGSRLVVVVSSPSVVHECFTKNDTVLANRPPLLAGKHLGYNYTAVTAAPYGDHWRNVRRIISLEILSSHRLNSFSGIRKNEIKKLMQNLARDCGDGFAKVELKLKFSEMTFNMIMRMIAGKRYYGEDCDVSDEEEAKRFREVITEFISVGGSSNPSEFVWIFRLFDFGSYEKRLKRISRRFDGFLQGLVDEHRRKNKNENTMIDHLLNLQESQPEYYTDQIIKGIVLVMILGGTETSATTLEWAMSALLNHPEVLKKAKDEIDTNIGQDHLVEESDISKLPYLQNIIHETFRLHPAFALLAPHFSSEDCSIGGYNVPKGTILLVNAWAIHRDFQLWSDPTQFKPERFEKEGEAEKLIPFGLGRRACPGANLGQRTVSLTLALCIQCFDWKRISEKEIDMTEGKGATTPKLIPLEAMCKARFNVINKVFLEEDENTSME 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02673 503 FunFam Cytochrome P450 family protein 19 488 - -
Vifa4g02673 503 Pfam Cytochrome P450 28 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02673 503 SUPERFAMILY Cytochrome P450 28 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02673 503 PRINTS E-class P450 group I signature 421 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02673 503 PRINTS E-class P450 group I signature 55 74 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02673 503 PRINTS E-class P450 group I signature 79 100 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02673 503 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02673 503 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02673 503 PRINTS E-class P450 group I signature 174 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02673 503 PRINTS E-class P450 group I signature 431 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02673 503 PRINTS E-class P450 group I signature 349 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02673 503 PRINTS E-class P450 group I signature 390 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02673 503 PANTHER CYTOCHROME P450 82C3-RELATED 7 486 - -
Vifa4g02673 503 PRINTS P450 superfamily signature 422 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02673 503 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02673 503 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02673 503 PRINTS P450 superfamily signature 431 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02673 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 424 433 IPR017972 GO:0005506|GO:0016705
Vifa4g02673 503 Gene3D Cytochrome P450 14 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02673 503 CDD CYP81 59 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02673 Vifa-Chr4 826520565 826522291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g02673 4 495 Cytochrome P450 AT4G37370 57.056 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02673 K13260 - gmx:100811727 688.723