Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02661 ATGAACTTCACCACCACCACAACAACAACCCTTTCTCTTTCTCTTTTTCTCACACTCTTGACACTAACCATTAACCTATGTTTTTCTCTTACCAACGACGGCTTTTTGTTGCATTCCTTCAAAGAATCCATACTCAACGACCCTTTATTCGTGCTTTCGAATTGGAACTATACCGACCAAACACCATGTTCATGGAACGGTGTTTCTTGCTCCATTGTAAAAGAAAACACAAAAAATGATACACTGTATCGTGTTACTGGTTTATCACTACCAAATTCTCAGCTTTTAGGTTTAATTCCCTCCGATCTTGGTTCCATTGAACATCTTCAAATTCTTGATCTTTCTAATAATTCCCTTAATGGGTCTCTTCCTTCTTCGTTTTTCCAAGAAAATTCTGAACTTAGTTTTCTGAATTTCTCAAACAATTTGTTATCGGGAGAAATTCCAGAGTCTATAACCGAGCTTAAGAATCTTCAGTTTCTTAACTTTTCCGACAATGCTTTTACCGGAAAACTACCAAACAATCTCTCAAACATGCAGAACTTAACCGTTGCTTCCTTTAAGAACAATTACTTAACCGGTTTTCTTCCTAAGGATTTACGAACTTTACAGGTTTTGGATCTGTCTTCCAATTTGTTGAACGGCTCACTAAGTCAAGATTTCGGCGGTGACTCCATTCGTTATTTGAACGTTTCTTACAACAAATTTTACGGCGAAATTCCACCGGAGTTTGCCGAGAAAATTCCGAGTAACGCAATGGTTGATCTCTCGTTTAATAATCTCACCGGCGAGATACCGGATTCCCCGGTTTTTCTGAATCAGGAAACAACGTCGTTTTCTGGTAACATTGATCTATGTGGAGAAATTATGAAAAATCCATGTTCTATTCCTTCTTCTCCTTCTTCTGAACCAAAAGCTTCTTCTCCTGCGATCGCCGCAATGCCGAAGAATTTCGACGATGATTCTCCTCCAACGGATTCCTCAGAGAAAAAACAAAGTGGTTTGAGAAAAGGAACTATTATAGGAATTGTGGTTGGAGATTTCGTTGGAATTGGAATTTTAGCTATGGTTTTCGTTTACGTATACAAGTTGAAAAGAAGAAAAGATGAAGAGAATGAAATAAAAAAGGAAGCTACAATTACAAGAAGTGAAAGTTCATCGTCAAATTCCGAAACCAGAGGCTTCACGAGGTGGTCATGTTTGAGAAAAAGAACAGAAGACGAAGAGTCCTCGGAGACTCCGAGTTCGTCTACCAGTGAAGTGGAAGCATCACAAAAAAATGTTGAAGGTGGTGTAAAAGAGAATCAAACCGGGTCGGGTTCGAATACGGGTACTCTGGTTACAGTTGATGGTGAAAGAGAGCTTGAAGTTGAAACGTTATTGAAAGCTTCTGCGTATATTTTAGGAGCTACTGGTTCAAGTATAATGTATAAGGCTGTGCTTGAAGATGGAACCTCGTTGGCGGTTCGGAGAATTGGTGAAAGTGGTGTTGAACGGTTCAAGGATTTCGAGAATCAGGTTCGGGTTATAGGAAAACTGGTTCACCCGAACCTGGTTCGGGTTCGTGGTTTTTACTGGGGACATGATGAGAAACTCATTATCTATGACTATGTTCCTAATGGTTGTCTCGCCAATGTTCGTTACAGAAAAGTGGGGTCTTCACCTAGCCACTTACCGTGGGAACAACGGCTCAAGATAGCAAAAGGAGTTGCACGTGGGCTAACGTATCTCCACGAGAAGAAGCACGTGCATGGGAATTTGAAGCCAACGAATATTCTATTGGGCAATGACATGGAGCCCAAAATCGGAGACTTTGGGCTTGAAAGAATAGTAACAGGTGACACAAGTTATAAAGCGGGAGGTTCAGCACGTATTTTCGGGAGTAAGAGATCAACAACTTCACGGGATAGTTTTCAAGATGTTACACTTGGGCCTAGCCCAAGCCCAAGTCCAAGCTCGATAGGTGGTGTGTCTCCTTATCATGCGCCCGAGTCGCTTAGGAATTTGAAGCCTCATCCAAAGTGGGATGTATATTCTTTTGGGGTCATGTTTCTTGAGCTTTTAACAGGAAAGATTGTAGTTTTGGATGATATGGGCCAAGGGCCCGCGGTAATGGTCGAGGATAAAAATCGGGCTCTGAGGATGGTTGATGTGGCAATTCGGGCTGATATGGAAGGGAAGGAGGAGGCTTTGTTGGCTTATTTTAAGTTAGGATATAATTGTGTCACTAATGTTCCTCAAAAAAGACCACCAATGAAAGAAGTGTTGCAAGTTCTAGAAAAAATACCATCTACATTGTCGTATTGGTCATGA 2313 0.4112 MNFTTTTTTTLSLSLFLTLLTLTINLCFSLTNDGFLLHSFKESILNDPLFVLSNWNYTDQTPCSWNGVSCSIVKENTKNDTLYRVTGLSLPNSQLLGLIPSDLGSIEHLQILDLSNNSLNGSLPSSFFQENSELSFLNFSNNLLSGEIPESITELKNLQFLNFSDNAFTGKLPNNLSNMQNLTVASFKNNYLTGFLPKDLRTLQVLDLSSNLLNGSLSQDFGGDSIRYLNVSYNKFYGEIPPEFAEKIPSNAMVDLSFNNLTGEIPDSPVFLNQETTSFSGNIDLCGEIMKNPCSIPSSPSSEPKASSPAIAAMPKNFDDDSPPTDSSEKKQSGLRKGTIIGIVVGDFVGIGILAMVFVYVYKLKRRKDEENEIKKEATITRSESSSSNSETRGFTRWSCLRKRTEDEESSETPSSSTSEVEASQKNVEGGVKENQTGSGSNTGTLVTVDGERELEVETLLKASAYILGATGSSIMYKAVLEDGTSLAVRRIGESGVERFKDFENQVRVIGKLVHPNLVRVRGFYWGHDEKLIIYDYVPNGCLANVRYRKVGSSPSHLPWEQRLKIAKGVARGLTYLHEKKHVHGNLKPTNILLGNDMEPKIGDFGLERIVTGDTSYKAGGSARIFGSKRSTTSRDSFQDVTLGPSPSPSPSSIGGVSPYHAPESLRNLKPHPKWDVYSFGVMFLELLTGKIVVLDDMGQGPAVMVEDKNRALRMVDVAIRADMEGKEEALLAYFKLGYNCVTNVPQKRPPMKEVLQVLEKIPSTLSYWS 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02661 770 MobiDBLite consensus disorder prediction 628 659 - -
Vifa4g02661 770 SUPERFAMILY Protein kinase-like (PK-like) 467 763 IPR011009 -
Vifa4g02661 770 FunFam Leucine-rich repeat receptor-like protein kinase 202 296 - -
Vifa4g02661 770 Pfam Protein kinase domain 468 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifa4g02661 770 MobiDBLite consensus disorder prediction 381 396 - -
Vifa4g02661 770 FunFam Os07g0541700 protein 543 628 - -
Vifa4g02661 770 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Vifa4g02661 770 MobiDBLite consensus disorder prediction 412 448 - -
Vifa4g02661 770 MobiDBLite consensus disorder prediction 628 655 - -
Vifa4g02661 770 PRINTS Leucine-rich repeat signature 200 213 - -
Vifa4g02661 770 PRINTS Leucine-rich repeat signature 109 122 - -
Vifa4g02661 770 ProSiteProfiles Protein kinase domain profile. 462 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifa4g02661 770 SUPERFAMILY L domain-like 28 287 - -
Vifa4g02661 770 Gene3D Transferase(Phosphotransferase) domain 1 539 767 - -
Vifa4g02661 770 CDD STKc_IRAK 468 762 - -
Vifa4g02661 770 Gene3D Ribonuclease Inhibitor 199 296 IPR032675 -
Vifa4g02661 770 Gene3D Ribonuclease Inhibitor 31 198 IPR032675 -
Vifa4g02661 770 MobiDBLite consensus disorder prediction 376 448 - -
Vifa4g02661 770 MobiDBLite consensus disorder prediction 397 411 - -
Vifa4g02661 770 FunFam Nuclear pore complex protein NUP107 31 198 - -
Vifa4g02661 770 PANTHER OS05G0588300 PROTEIN 188 763 - -
Vifa4g02661 770 MobiDBLite consensus disorder prediction 294 334 - -
Vifa4g02661 770 Gene3D Phosphorylase Kinase; domain 1 436 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02661 Vifa-Chr4 820676337 820679267 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g02661 29 762 Receptor kinase-like Gene Family AT4G37250 60.317 0.0 823
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Vifa4g02661 Pkinase 2.6e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02661 - - gmx:100784503 1071.23