Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02644 ATGGCAGTAGAACTCATGACAGGTTACAACACAACGAAAACCTTCACATCCATAGCCGAACAAAATGCTGTCCAAGAAGCAGCTTCTGGCTTAGAAAGCGTTGAAAAACTCATCCAATTACTCTCCCAAGCACGCCATAAGTATCAAAACTCTTCATCTTCCTCTTCCTTCTCACCCTCAAATCCCAACAACAACAACAACGCTTCCATGGAGATTGAAAGAGACTGCAAAGCCGTCGCTGACATCGCTGTTTCCAAATTCAAACGAGTTATTTCACTTCTTGAAAAAACCAGAACCGGCCACGCTCGTTTCAGAAAAGCACCTCTACCGCAAACTCAACCTGAACAACCAATCTTCAACGCTACACCTCTTCAACAGATTCCTCCTCCTCCAACAACAACAACAACAACTACAACCCTTCACCGTCCTATAATCAAGAGAAACGATTCCTCAAAGACCCTCAATTTTTCCTACTCCTCCGCTGCTAATTCCTTCATTTCATCACTCACCGGCGAGACGGACAACAAACACCAACCCTCGGCTTCCTCGCCGGCCGGAGGTTTTCAGATCACGAATCTGTCTCATGTTTCGTCTGTTGGTAAGCCCCCACTGTCTTCTTCTATGATGAAAAGAAAGTGCAGCTCTGAAACTTTGGGTTCTGGAAAGTGCGGTAGTTCTTCTAGCCGCTGTCATTGTTCCAAGAAAAGTAGGAAATTGAGATTGAAGAGAGTTGTTAGGGTTCCTGCAATCAGTTTGAAGATGGCTGATATTCCACCAGATGATTATTCTTGGAGAAAATATGGCCAGAAACCTATTAAGGGTTCTCCTCATCCAAGAGGGTACTACAAGTGCAGTAGTGTGAGAGGGTGTCCAGCAAGAAAACATGTAGAAAGAGCACTTGATGATGCATCTATGTTGGTGGTAACCTATGAAGGAGAGCACAACCACTCACTTTCTGCAGCAGATGCAACTAATCTCATTTTAGAATCATCTTAA 996 0.4418 MAVELMTGYNTTKTFTSIAEQNAVQEAASGLESVEKLIQLLSQARHKYQNSSSSSSFSPSNPNNNNNASMEIERDCKAVADIAVSKFKRVISLLEKTRTGHARFRKAPLPQTQPEQPIFNATPLQQIPPPPTTTTTTTTLHRPIIKRNDSSKTLNFSYSSAANSFISSLTGETDNKHQPSASSPAGGFQITNLSHVSSVGKPPLSSSMMKRKCSSETLGSGKCGSSSSRCHCSKKSRKLRLKRVVRVPAISLKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDASMLVVTYEGEHNHSLSAADATNLILESS 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02644 331 FunFam WRKY transcription factor 65 242 319 - -
Vifa4g02644 331 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 24 324 IPR044810 GO:0003700
Vifa4g02644 331 Pfam Plant zinc cluster domain 210 256 IPR018872 -
Vifa4g02644 331 MobiDBLite consensus disorder prediction 49 68 - -
Vifa4g02644 331 SUPERFAMILY WRKY DNA-binding domain 255 318 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vifa4g02644 331 ProSiteProfiles WRKY domain profile. 253 319 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vifa4g02644 331 MobiDBLite consensus disorder prediction 169 224 - -
Vifa4g02644 331 SMART WRKY_cls 258 318 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vifa4g02644 331 Pfam WRKY DNA -binding domain 260 316 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vifa4g02644 331 Gene3D WRKY domain 245 319 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02644 Vifa-Chr4 811550067 811551474 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g02644 1 316 WRKY Transcription Factor Family AT2G24570 42.647 4.45e-70 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vifa4g02644 WRKY 9.5e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02644 - - qsu:112030051 394.815