Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02629 ATGGATTCTGTGAAAGTAATCTCCACAGGTACAATCCAAGCACCGAGTCACAACAATGGCAACTCATCTCAAACAATCGAGTTAACACCATGGGATCTTCAGTTCCTCCAACTAGAAACCATACAAAAAGGTCTTCTTTTCCACCAACCCACTCTCGCATCAAACCAAAACCAAATCAATCATTTGAAACAAACTCTTTCAACCACACTCTCCTTCTTCCCTCCCTTAACAGGCCGTCTCATTATCACACAACACAACGACCACAACAACAACGCTTCATGTTCCATCCTTTGCAACAACGTTGGTGCTCTCTTCGTTCACGCCATAGCGGAAAACACTACCGTTTCCGACATCCTTCAACCCAACTACATACCTCCCATTGTTCACTCCTTTTTCCCACTTAACGGCGTTAAAAACCACGAAGCCACTTCCCAGCCAATTCTAGCAGTCCAAGTAACGGAGTTAAGTAACGGAATCTTCATTGCTTTCACTATCAACCACGTTGTTTCAGACGGCAAGTCGTTTTGGCATTTCGTCAACTCTTGGTCACAAATCTCAAAAGGTTCTCAGAAAATAACTAAACTGCCTTCACTTCAACGTTGGTTCCCAAACGACATTGAACTTCCAATACGATTCCCTTTCACTAAAAAAGAATCACAGAACAGAAGCAGTTCTAAAAAGTTACCAGAAAGAATCTTTCATTTCACCAAGGAGAAAATCGCAGAACTGAAATCAAAAGCAAACGCTGAAGCCAAAACCCAAACAGATGAAACTAAAATATCTTCCCTTCAAGCGCTACTATCTCACATTTGGCGTCGCGTTGTTCGTTGCAAAAAACCAGATCCACTAGAAGATATTCGTTACGTGTTAAGTATAGGTGCTAGACCTAGAATGATTCCGCCGCTGGAAGATGATTATTTTGGAAATGCTGCGGTGTTTGCTGGTTTGGCGATGAAAGCCGAGGACATTCTAGAGGGTGGAATCGGAAAAGTTGGTTTGGAGATGAACAAGTTGATTATGTTACATTGTGATGAGAAAATAAGGAATAATTATGAGTGTTGGTTGAGAGTGCCGAGGTTGATAGAGGTTGCTGGTTTGGCAAATGATAATTCATTGGCAACTAGTAGTTCTCCAAGGTTTGATGTTTATGGTAATGATTTTGGTTGGGGGAAGCCTGTGGCGGTTAGAAGTGGGGGTGCTAATAAGAGTAATGGGAAGATTACTGTGTTTGCTGGAACTGAAGAAGGTAGTATTGATATTGAAATTTGTCTTTGTAACGGGATTTTGGAAGCTTTGGGAAATGACACTGAGTTTGTGGTTCCTATTTCTAAGTAA 1335 0.415 MDSVKVISTGTIQAPSHNNGNSSQTIELTPWDLQFLQLETIQKGLLFHQPTLASNQNQINHLKQTLSTTLSFFPPLTGRLIITQHNDHNNNASCSILCNNVGALFVHAIAENTTVSDILQPNYIPPIVHSFFPLNGVKNHEATSQPILAVQVTELSNGIFIAFTINHVVSDGKSFWHFVNSWSQISKGSQKITKLPSLQRWFPNDIELPIRFPFTKKESQNRSSSKKLPERIFHFTKEKIAELKSKANAEAKTQTDETKISSLQALLSHIWRRVVRCKKPDPLEDIRYVLSIGARPRMIPPLEDDYFGNAAVFAGLAMKAEDILEGGIGKVGLEMNKLIMLHCDEKIRNNYECWLRVPRLIEVAGLANDNSLATSSSPRFDVYGNDFGWGKPVAVRSGGANKSNGKITVFAGTEEGSIDIEICLCNGILEALGNDTEFVVPISK 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02629 444 MobiDBLite consensus disorder prediction 1 23 - -
Vifa4g02629 444 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 7 438 - -
Vifa4g02629 444 Pfam Transferase family 4 438 - -
Vifa4g02629 444 Gene3D - 213 434 IPR023213 -
Vifa4g02629 444 Gene3D - 2 209 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02629 Vifa-Chr4 805719331 805720665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g02629 45 424 Monolignol Biosynthesis Gene Families AT5G48930 26.633 4.70e-29 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02629 - - gmx:100500257 565.459