Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02622 ATGGCCCTGAATAATGATGAGAAACAGCAAAACAAACCCATCGAACACAATGAACTCGCTCACAAAAGTCTCCTTCAAAGTGATGCACTTTATCAGTATATACTTGAGACCAGTGTGTTTCCAAGAGAGCACCCATGTTTGAAGGAGCTTCGTAAGATGACAGAAAAACATTCTCGGAATTATATGGCTATACCTGCTGATGAAGGACAACTTCTAAGCATGCTGATTAAGCTCACCAATGCAAAAAACACATTGGAGATTGGTGTGTTCACCGGTTATTCTTTGCTCTCCACTGCTCTTGCTCTTCCCTCTGATGGAAAGGTATTGGCTTTGGACGTTAGTCGTGAATACTATGAGCTGGGATTGCCTATAATTGAAAAGTCTGGAGTTGCTAACAAGATTGACTTTAGAGAAGGACATGCTCTCCCTTTTCTTGATGAACTTCTTCAAGACAAAAATAATAAGGGGACATTTGATTTTGTTTTTGTGGATGCTGATAAGGATAATTACTTAAACTATCACAAGAGGGTAATTGAGCTTGTGAAAGTTGGAGGATTGATCGGTTATGATAACACCTTATGGAGTGGATCTGTAGCAGCTCCATCTGATGCACCTATGATGGATAATATTAAACATTTACGTGGTTATGTGATTGAGCTCAACAAATATCTAGCTCAAGATATAAGGATTGAGATTTGTCAGCTCCCAGTAGGTGATGGGATTACCCTGTGTCGCCGCATCAGCTGA 747 0.4016 MALNNDEKQQNKPIEHNELAHKSLLQSDALYQYILETSVFPREHPCLKELRKMTEKHSRNYMAIPADEGQLLSMLIKLTNAKNTLEIGVFTGYSLLSTALALPSDGKVLALDVSREYYELGLPIIEKSGVANKIDFREGHALPFLDELLQDKNNKGTFDFVFVDADKDNYLNYHKRVIELVKVGGLIGYDNTLWSGSVAAPSDAPMMDNIKHLRGYVIELNKYLAQDIRIEICQLPVGDGITLCRRIS 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02622 248 CDD AdoMet_MTases 85 187 - -
Vifa4g02622 248 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 23 247 IPR002935 GO:0008171
Vifa4g02622 248 FunFam Caffeoyl-CoA O-methyltransferase 1 16 248 - -
Vifa4g02622 248 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 27 246 IPR029063 -
Vifa4g02622 248 PANTHER O-METHYLTRANSFERASE-RELATED 20 247 - -
Vifa4g02622 248 Gene3D Vaccinia Virus protein VP39 14 248 IPR029063 -
Vifa4g02622 248 Pfam O-methyltransferase 37 247 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02622 Vifa-Chr4 805077261 805080056 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g02622 4 248 Monolignol Biosynthesis Gene Families AT4G34050 69.796 8.97e-130 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02622 K00588 - gmx:100305498 404.06