Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02573 ATGCAGTCCCTGCAATCATTTGCTTTCATTTTAATATTTGTAATTCTTGCATTTGATGTTTGTGAATCTGATGATTGTAGCAATCCCTTGAAGAGCATTAGTGTTAGTCAATCAGGCAAAGCAAATTTCAAAACAATTCAAAGTGCCATTGATTCTGTCCCTGCAGGAAACTCTCAATGGATTCATATCCAAATATCCTCTGGTGTTTACAAAGAGCAAGTATTAATTCCAAAAAACAAACCATGCATTTATCTTGAAGGAGCTGGTAGCAAGTCCACAAGTATAGAATGGGGCTCTCATGAAAATGCTACTTTCGATATAAAAGCAAGCAATACTGCTGCAAAGGGAATAACTTTTACGAATACATTGAACAAGCCAGTATTATTAGACGTGATTAACGTTGTACAAGCCAAAGCTGCGAAAATCCATGCAGATAAATGTGCTTTCTATAGCTGTTCTTTTCTTGGGGTGCAAAAATATGTTTTGTGTGAATCTTGCAGGCTGCTAGGTATGCGTAGCTTGGACCAAATGGTAGTCAAGGAAGGATCATGGTCCTAG 558 0.3763 MQSLQSFAFILIFVILAFDVCESDDCSNPLKSISVSQSGKANFKTIQSAIDSVPAGNSQWIHIQISSGVYKEQVLIPKNKPCIYLEGAGSKSTSIEWGSHENATFDIKASNTAAKGITFTNTLNKPVLLDVINVVQAKAAKIHADKCAFYSCSFLGVQKYVLCESCRLLGMRSLDQMVVKEGSWS 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02573 185 SUPERFAMILY Pectin lyase-like 33 166 IPR011050 -
Vifa4g02573 185 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 25 162 - -
Vifa4g02573 185 Gene3D - 27 177 IPR012334 -
Vifa4g02573 185 Pfam Pectinesterase 33 165 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02573 Vifa-Chr4 783728107 783728833 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g02573 7 167 Carbohydrate Esterase AT2G19150 37.952 2.57e-24 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02573 - - mtr:25501033 246.899