Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02514 ATGGAAATGGTTCTCATGGATGATAAGGGTAACAAAATCCAAGCTTCAATTGGAAAAGCCTTGCTGCCTCGATTTGAAAATAAGATTAACGAGGGAGCTGCTTATAATTTCAAGTCATTTGGTGTCTCCGCTAATACTGGAGCATTTAGGACCCCAAAAAACCAATTTAAATTGAATTTTCAGAATGGCACGGTTGTCACAGATGTTGGAACTGGAATGACAACATTATCTCCTTATTCATTTGCATCTTTTCCAGATATTGTTGACAACATTGACATGGACTACTTGATTGATGTTATGGGTATTTTGTCTTCTCTTGGTCGTGAAAGGGTGTATGAAAGGAATCGTGTAACTACTAAATTTAAAACTATTGAGTTGGAATCCAATGGAATGAAGCTCGAGTGCACGTTATTTGGACCGTATTTTGATGCCCTTGTCGCATTCCTGCAATCCGACTACACTGGAAATGTTGTTGTGCTTGCTCAGTATCAAAAATTGAAATTGTATAATGGAAAAGTCCAACTTAAAAATGCAACAAACTGTACCAAGCTTTTGTTTAACCCTGAAATTCCTGAGGCGGATAGTTTGGAGCTCTGGGGTAACATTGGATCACCTATACAATTGTTCAATTATATGAAGGATGCTTCTGAGTTGAGACTAGAAGAAGAATTTTTGAGCTTGATTCAACACAAAACTATTAAGGAACTGGAGGATTGTCAAGATGGACAATCAAACATGTTATTGGTGGTAACGATTGGCGGTATGCTGCATGTGTCTGCAACAAGGGTGTTGTTGCAGATTCCAAAAGGATTTTCTGCCCTAAGTGCAACAAACATGTTTGGACAATTGTGCCAAGGTAACATATCAAACTCATGCCAACTCAAGAATAAAAAAAACATTAAGATTGAGAATGAATGA 918 0.3758 MEMVLMDDKGNKIQASIGKALLPRFENKINEGAAYNFKSFGVSANTGAFRTPKNQFKLNFQNGTVVTDVGTGMTTLSPYSFASFPDIVDNIDMDYLIDVMGILSSLGRERVYERNRVTTKFKTIELESNGMKLECTLFGPYFDALVAFLQSDYTGNVVVLAQYQKLKLYNGKVQLKNATNCTKLLFNPEIPEADSLELWGNIGSPIQLFNYMKDASELRLEEEFLSLIQHKTIKELEDCQDGQSNMLLVVTIGGMLHVSATRVLLQIPKGFSALSATNMFGQLCQGNISNSCQLKNKKNIKIENE 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02514 305 CDD RPA1_DBD_A_like 1 66 - -
Vifa4g02514 305 SUPERFAMILY Nucleic acid-binding proteins 79 201 IPR012340 -
Vifa4g02514 305 Gene3D - 76 204 IPR012340 -
Vifa4g02514 305 CDD RPA1_DBD_B_like 98 192 - -
Vifa4g02514 305 Gene3D - 1 68 IPR012340 -
Vifa4g02514 305 SUPERFAMILY Nucleic acid-binding proteins 2 67 IPR012340 -
Vifa4g02514 305 Pfam Domain of unknown function DUF223 2 90 IPR003871 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02514 Vifa-Chr4 762776592 762778661 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g02514 5 203 Core DNA Replication Machinery Family AT2G06510 23.415 1.91e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02514 - - cam:101506477 293.893