Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02410 ATGTGGAATATATCAAAGGAAGAACTAGTAATGGTAGTGCAAAACTATTATGACATGGTCATGGTCTTATTTCTCTCTATAGGATTAACATATTTAGCTTCAAGAGCTTGGAAAAGAGCTACAAGCAAGAGAGAAGACATCCCTGGCCGGCTTGGATTACCTCTTATTGGGGAAACTTTTTCTTTTCTTTCAGCCGCTAATAGTACAAGAGGATGCTATGATTTTGTCAGACTTAGACGATTGTGGCACGGGAGATGGTTCAAGACAAGGCTATTTGGCAAGATTCACATATTTATTCCTAATCCTGAAGGTGCAAGGACAATATTTGCTAATGACTTTGATCTATTCAACAAGGGCTATGTAAAATCAATGGCAGATGCCGTAGGAAAGAAAAGCTTATTGTGTATACCAGTTGAGAGCCACAAAAGAATAAGGCGACTTCTATCCGAACCATTCTCTATGACTTCCTTATCTGCATTTATCACAAAGTTTGACAAAATGTTGTGTGGAAGGCTGCAAAAGCTAGAAGAAAAGGGGGAAAGTTTTAAGGTGTTGGATTTCTCCATGAAGATGACATTTGATGCAATGTGCGATATGCTGATGAGCATCACGGAGGATTCATTACTACGACAGATTGAGAAAGACTGCACTGCTGTCTCTGATGCCATGTTGTCCTTTCCAGTCATGATTCCAGGCACAAGATACTATAAAGGCATCATGCTTAAGCAGGGTCGTAAAAGGCTTATGGAAACCTTCAGAGAGATCATTACTAGACGTAGGACGGGAGAAGAGTCTCCAGGGGACTTCCTGCAGTCCATGTTGCAGAGAGACTCATTTCCAGACAGTGAAAAGCTTGATGACTCGGAAATTATGGATAATCTTTTGACATTGATAATTGCGGGACAGACTACAACAGCAGCGGCAATGACGTGGAGTGTAAAATTTCTACATGACAACAGAGATGCACAGGACATACTCAGGGACGAACAGTTGTCTTTAACCAAAATGAAGCCAGAAGGAGCTTCACTTAATCATGAAGATATCAACAACATGCGTTACGGTTTGAAGGTAGTTAAGGAAACACTAAGAATGTCTAATGTCCTATTATGGTTTCCTCGTGTTGCACTTAATGACTGTACAATTGAAGGGTATGAAATAAAGAAAGGCTGGCATGTTAACATTGATGCAACTTGTATACATTATGACTCAGATCTATTCAAGGATCCATTGAAATTTAACCCACAAAGATTTGATGAAATGCAAAAGCCCTACAGTTTTATACCTTTTGGATCAGGGCCTAGGACTTGCCTTGGGATGAATATGGCAAAAGTGACAATGTTGGTCTTTTTACACAGACTAACTAGTTGTTACACGTGGACCCTTGATGATTTAGATACTTGCTTAGAAAAGAAGGCACACATACCTAGACTAAGGAGTGGCTGTCCAATAACATTGAAGTCCATAAGCAATAGCATGCCAGAGGCATAG 1488 0.4005 MWNISKEELVMVVQNYYDMVMVLFLSIGLTYLASRAWKRATSKREDIPGRLGLPLIGETFSFLSAANSTRGCYDFVRLRRLWHGRWFKTRLFGKIHIFIPNPEGARTIFANDFDLFNKGYVKSMADAVGKKSLLCIPVESHKRIRRLLSEPFSMTSLSAFITKFDKMLCGRLQKLEEKGESFKVLDFSMKMTFDAMCDMLMSITEDSLLRQIEKDCTAVSDAMLSFPVMIPGTRYYKGIMLKQGRKRLMETFREIITRRRTGEESPGDFLQSMLQRDSFPDSEKLDDSEIMDNLLTLIIAGQTTTAAAMTWSVKFLHDNRDAQDILRDEQLSLTKMKPEGASLNHEDINNMRYGLKVVKETLRMSNVLLWFPRVALNDCTIEGYEIKKGWHVNIDATCIHYDSDLFKDPLKFNPQRFDEMQKPYSFIPFGSGPRTCLGMNMAKVTMLVFLHRLTSCYTWTLDDLDTCLEKKAHIPRLRSGCPITLKSISNSMPEA 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02410 495 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02410 495 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02410 495 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02410 495 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02410 495 Gene3D Cytochrome P450 37 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02410 495 SUPERFAMILY Cytochrome P450 44 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02410 495 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Vifa4g02410 495 CDD CYP90-like 79 485 - -
Vifa4g02410 495 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02410 495 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02410 495 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02410 495 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02410 495 PANTHER CYTOCHROME P450 26 47 460 - -
Vifa4g02410 495 FunFam cytochrome P450 90A1-like isoform X1 37 488 - -
Vifa4g02410 495 Pfam Cytochrome P450 52 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02410 Vifa-Chr4 726874063 726877204 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g02410 48 460 Cytochrome P450 AT1G19630 45.324 1.94e-125 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02410 - - gmx:100789430 857.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g02410 4 726874063 726877204 Vifa4g02410 4 726874063 726877204 ECH