Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02409 ATGTGGAATATATCAAAGGAAGAACTAGTAATGGTAGTGCAAAACTATTATGACATGGTCATGGTCTTATTTCTCTCTATAGGATTAACATATTTAGCTTCAAGAGCTTGGAAAAGAGCTACAAGCAAGAGAGAAGACATCCCTGGCCGGCTTGGATTACCTCTTATTGGGGAAACTTTTTCTTTTCTTTCAGCCGCTAATAGTACAAGAGGATGCTATGATTTTGTCAGACTTAGACGATTGTGGCACGGGAGATGGTTCAAGACAAGGCTATTTGGCAAGATTCACATATTTATTCCTAATCCTGAAGGTGCAAGGACAATATTTGCTAATGACTTTGATCTATTCAACAAGGGCTATGTAAAATCAATGGCAGATGCCGTAGGAAAGAAAAGCTTATTGTGTATACCAGTTGAGAGCCACAAAAGAATAAGGCGACTTCTATCCGAACCATTCTCTATGACTTCCTTATCTGCATTTATCACAAAGTTTGACAAAATGTTGTGTGGAAGGCTGCAAAAGCTAGAAGAAAAGGGGGAAAGTTTTAAGGTGTTGGATTTCTCCATGAAGATGACATTTGATGCAATGTGCGATATGCTGATGAGCATCACGGAGGATTCATTACTACGACAGATTGAGAAAGACTGCACTGCTGTCTCTGATGCCATGTTGTCCTTTCCAGTCATGATTCCAGGCACAAGATACTATAAAGGCATCATGGGTCGTAAAAGGCTTATGGAAACCTTCAGAGAGATCATTACTAGACGTAGGACGGGAGAAGAGTCTCCAGGGGACTTCCTGCAGTCCATGTTGCAGAGAGACTCATTTCCAGACAGTGAAAAGCTTGATGACTCGGAAATTATGGATAATCTTTTGACATTGATAATTGCGGGACAGACTACAACAGCAGCGGCAATGACGTGGAGTGTAAAATTTCTACATGACAACAGAGATGCACAGGACATACTCAGGGACGAACAGTTGTCTTTAACCAAAATGAAGCCAGAAGGAGCTTCACTTAATCATGAAGATATCAACAACATGCGTTACGGTTTGAAGGTAGTTAAGGAAACACTAAGAATGTCTAATGTCCTATTATGGTTTCCTCGTGTTGCACTTAATGACTGTACAATTGAAGGGTATGAAATAAAGAAAGGCTGGCATGTTAACATTGATGCAACTTGTATACATTATGACTCAGATCTATTCAAGGATCCATTGAAATTTAACCCACAAAGATTTGATGAAATGCAAAAGCCCTACAGTTTTATACCTTTTGGATCAGGGCCTAGGACTTGCCTTGGGATGAATATGGCAAAAGTGACAATGTTGGTCTTTTTACACAGACTAACTAGTTGTTACACGTGGACCCTTGATGATTTAGATACTTGCTTAGAAAAGAAGGCACACATACCTAGACTAAGGAGTGGCTGTCCAATAACATTGAAGTCCATAAGCAATAGCATGCCAGAGGCATAG 1479 0.4003 MWNISKEELVMVVQNYYDMVMVLFLSIGLTYLASRAWKRATSKREDIPGRLGLPLIGETFSFLSAANSTRGCYDFVRLRRLWHGRWFKTRLFGKIHIFIPNPEGARTIFANDFDLFNKGYVKSMADAVGKKSLLCIPVESHKRIRRLLSEPFSMTSLSAFITKFDKMLCGRLQKLEEKGESFKVLDFSMKMTFDAMCDMLMSITEDSLLRQIEKDCTAVSDAMLSFPVMIPGTRYYKGIMGRKRLMETFREIITRRRTGEESPGDFLQSMLQRDSFPDSEKLDDSEIMDNLLTLIIAGQTTTAAAMTWSVKFLHDNRDAQDILRDEQLSLTKMKPEGASLNHEDINNMRYGLKVVKETLRMSNVLLWFPRVALNDCTIEGYEIKKGWHVNIDATCIHYDSDLFKDPLKFNPQRFDEMQKPYSFIPFGSGPRTCLGMNMAKVTMLVFLHRLTSCYTWTLDDLDTCLEKKAHIPRLRSGCPITLKSISNSMPEA 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02409 492 FunFam cytochrome P450 90A1-like isoform X1 37 485 - -
Vifa4g02409 492 SUPERFAMILY Cytochrome P450 37 481 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02409 492 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02409 492 PRINTS E-class P450 group I signature 433 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02409 492 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02409 492 PRINTS E-class P450 group I signature 423 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02409 492 CDD CYP90-like 79 482 - -
Vifa4g02409 492 PANTHER CYTOCHROME P450 26 47 457 - -
Vifa4g02409 492 Pfam Cytochrome P450 52 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02409 492 Gene3D Cytochrome P450 37 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02409 492 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 426 435 IPR017972 GO:0005506|GO:0016705
Vifa4g02409 492 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02409 492 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02409 492 PRINTS P450 superfamily signature 424 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02409 492 PRINTS P450 superfamily signature 433 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02409 Vifa-Chr4 726874063 726877204 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g02409 48 457 Cytochrome P450 AT1G19630 45.652 1.81e-127 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02409 - - gmx:100789430 862.833