Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02391 ATGTCAACGGAATCCCTCAAGCGCGAGCACTGGCAATGGGAGAACGCCATCGCCGGTGCCGCCGCCGGATTCGCCACCGTCGCCGTCATGCATCCCCTCGACGTTGTCCGAACTAGGTTTCAAGTTAACGATGGTCGAGTTTCTCATCTTCCCAGTTACAAGAACACCGCTCACGCAATTTTCACCATTACTCGCACCGAGGGATTAAGAGGGCTATATGCAGGCTTTCTTCCTGGGGTTCTTGGCTCAACTATATCTTGGGGTTTATATTTCTTTTTCTATGACAAAGCTAAACAAAGATATGCTAGGAGCAGAGAGGAGAAGTTGAGCCCGGGTCTTCATCTTGCCTCAGCTGCGGAAGCAGGAGCTTTGGTTTGTTTATGCACAAATCCTGTTTGGCTAGTGAAGACAAGATTGCAGCTTCAGACTCCTCTTCATCAGACACGGCCTTACTCTGGGTTATATGATGCATTTAGGACCATAATGAGGGAAGAAGGATTTAGTGCACTTTACAGAGGGATTGTTCCCGGTCTATTTCTGGTCTCTCATGGCGCTATTCAGTTCACAGCCTACGAAGAGCTGCGCAAAACTATTGTTGATTTTAAGAGCAAGAGAAGTGAAATACAAAATCAAAACCCTGATCAACTCTTGAATTCTGTTGATTATGCTGTTCTTGGAGCAACATCAAAAGTTGCTGCAATACTCCTAACCTATCCATTTCAGGTTATCCGGTCTCGATTGCAGCAACGACCCGGTGGTAATGGGATACCAAGATATATGGACAGCTGGCATGTTGTGAAAGAAACTGCCCGATTTGAAAGTGTCCGAGGTTTTTACAAGGGAATCACGCCAAACCTCTTGAAAAACGTTCCTGCTTCTTCGATAACATTTATTGTTTATGAAAATGTTATAAAATTACTAAAACTAGCTAGAAAGAATGACTGA 945 0.4476 MSTESLKREHWQWENAIAGAAAGFATVAVMHPLDVVRTRFQVNDGRVSHLPSYKNTAHAIFTITRTEGLRGLYAGFLPGVLGSTISWGLYFFFYDKAKQRYARSREEKLSPGLHLASAAEAGALVCLCTNPVWLVKTRLQLQTPLHQTRPYSGLYDAFRTIMREEGFSALYRGIVPGLFLVSHGAIQFTAYEELRKTIVDFKSKRSEIQNQNPDQLLNSVDYAVLGATSKVAAILLTYPFQVIRSRLQQRPGGNGIPRYMDSWHVVKETARFESVRGFYKGITPNLLKNVPASSITFIVYENVIKLLKLARKND 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02391 314 FunFam folate transporter 1, chloroplastic isoform X1 1 105 - -
Vifa4g02391 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 217 306 IPR018108 -
Vifa4g02391 314 Pfam Mitochondrial carrier protein 11 103 IPR018108 -
Vifa4g02391 314 Pfam Mitochondrial carrier protein 109 199 IPR018108 -
Vifa4g02391 314 Pfam Mitochondrial carrier protein 220 308 IPR018108 -
Vifa4g02391 314 SUPERFAMILY Mitochondrial carrier 12 302 IPR023395 -
Vifa4g02391 314 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 12 310 IPR044712 GO:0006862|GO:0055085
Vifa4g02391 314 Gene3D Mitochondrial carrier domain 100 314 IPR023395 -
Vifa4g02391 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 100 IPR018108 -
Vifa4g02391 314 FunFam Folate transporter 1, chloroplastic 106 312 - -
Vifa4g02391 314 Coils Coil 191 211 - -
Vifa4g02391 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 197 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02391 Vifa-Chr4 723284556 723289679 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g02391 32 307 Chloroplast and Mitochondria Gene Families AT2G47490 37.456 1.60e-48 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02391 K15115 - gmx:100809599 556.214