Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02389 ATGTCGACGGAACCACCGTCCAAGCGCGATAAGTTGCAATGGGAATACCCGGTCGCTGGTTTAATATCCGGATTCGCCACCTTAACCGTAAAGTATCCCCTCGACCTTGTCTCAACTAGGCTTCAAGTTAACGATGGTCGACTCTTCTCTCAATTTCCTAGATACAAGAACACCGCTCACGCCTTTTTCACCATTGCTCGCTTCGACGGATTGAAAGGCTTATATGCAGGCTTTCTTGCTGGGATTCTTGGGTCAAGTATTTCATCGGGTTTAGTACTCGTTTGCTATGCCAGAGCTAAACAAAAATATGCTAAGAGCAAAGAGGAGAAGTTTCATCCAGGTCTTGCCTCAGTTGTGGAAACAGGAGCTTTGGTTTGCTTGTGCGCAAATCCTGTTTGGATAGTGAAGACAAGGTTGCAGCTTCAGACACCTCTTCATCAGACACGGCCATACTCTGGGCTCTATGATGCATTTAGGACCATAGTAAGGGAAGAAGGGTTTAGGGCACTTTTCAGAGGAATTGTTCCTGGTTTATTCCTGGTCGCTCATGGTGCTATTCACGTCACTGCATACCAGGAGCTTCGTAAAACTCTTACTCATTTGAAGAATAAAGGAAGTAATATACAACATCAAAACCCTGATAAAATTTTGAATTCTGTTGATTCTGCTGTTCTTGGAGCAACATCAAAAGTTGCTGCAATACTCCCAGCCTATCCATTTCATGTTATACAGACTCGCTTGCAGCTACGACCTGACAGTGATGGGATATCAAGATATAAGAACAGTTGGCATGTTGTGAAAGAAACTGCACGATTTGAAGGTGTTCGAGGTTTTTACAAGGGAATCACTGCGAACCTCTTGAAAAACATTCCTGCTGCTTCAATAACATTTGTTGTTTATGAAAATGTTCTGAAATTACTTAAACAGGCTAGAAGGAAGGACTGA 945 0.4307 MSTEPPSKRDKLQWEYPVAGLISGFATLTVKYPLDLVSTRLQVNDGRLFSQFPRYKNTAHAFFTIARFDGLKGLYAGFLAGILGSSISSGLVLVCYARAKQKYAKSKEEKFHPGLASVVETGALVCLCANPVWIVKTRLQLQTPLHQTRPYSGLYDAFRTIVREEGFRALFRGIVPGLFLVAHGAIHVTAYQELRKTLTHLKNKGSNIQHQNPDKILNSVDSAVLGATSKVAAILPAYPFHVIQTRLQLRPDSDGISRYKNSWHVVKETARFEGVRGFYKGITANLLKNIPAASITFVVYENVLKLLKQARRKD 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02389 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 217 306 IPR018108 -
Vifa4g02389 314 SUPERFAMILY Mitochondrial carrier 14 302 IPR023395 -
Vifa4g02389 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 197 IPR018108 -
Vifa4g02389 314 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 13 312 IPR044712 GO:0006862|GO:0055085
Vifa4g02389 314 Gene3D Mitochondrial carrier domain 3 117 IPR023395 -
Vifa4g02389 314 Pfam Mitochondrial carrier protein 219 309 IPR018108 -
Vifa4g02389 314 Pfam Mitochondrial carrier protein 14 106 IPR018108 -
Vifa4g02389 314 Pfam Mitochondrial carrier protein 121 199 IPR018108 -
Vifa4g02389 314 Gene3D Mitochondrial carrier domain 118 312 IPR023395 -
Vifa4g02389 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 11 102 IPR018108 -
Vifa4g02389 314 FunFam Folate transporter 1, chloroplastic 108 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02389 Vifa-Chr4 722719303 722726457 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g02389 33 309 Chloroplast and Mitochondria Gene Families AT1G25380 29.225 1.06e-32 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02389 K15115 - gmx:100809599 419.853