Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02378 ATGAACAACAATATTGGCATGGAAGTTGAGGAGACTGTAAGAGAGTTGAGTCAATACTTCAAAACAGGAAAAACAAAAAGTGTTGCATGGAGAAAAAACCAGCTCCAAGCTGTACTTGACCTTGTTCATGAAAATGAAGATGCTATATCTGAAGCTCTTTACCAAGATCTCGGGAAGCACCCTGTTGAAGCTTACCGTGATGAGATTGGAGGAGTAGAAAAATCAGCACAAAACTCTTTGATCAGTGTTGAAAAATGGATGGCTCCTAAAAAAAGCAGTATGCCTCTAATTTTCTTCCCATCAAAAGGAGAGTTATTGCCAGAACCACTCGGCGTGGTTCTTATTTTTTCATCTTGGAACTTTCCGATCGTGTTGGCATTGGATCCAATAATTGGAGCAATATCTGCTGGAAATGTTGTTCTGATAAAACCATCGGAGCAAGCTCCAGCATGCTCTTCTTTTCTTGCGAATACTCTTCCTCGCTACTTGGACACTAATGCTGTAAAGGTCGTCGAGGGTGGAGGAGATGTCTGTGAAAAACTTCTGCAACATAAATTTGACAAAATATTCTTCACTGGAAGTCCAAGAGTGGCAAGGATAGTTATGACTTCTGCTGCAAAAAATTTAACTCCTGTGACTCTAGAGCTAGGTGGAAAATGTCCAGCTATATTTGATTACCTTTCTAATCCTTCAGATTTTAAGATGGCAGTGAAAAGAATAGTAGGAGCAAAGTGGGGAATCTGTAGTGGACAAGCATGTATAGGAATCGATTATGTGCTTGTTGAGGAGAAGCACTCATCTGAATTGATAGAACTATTAAAGAAGTTTGTGAGAAGATTGTATGGTGATAATATGATAGAGTCAAAGGTACTGTCAAGAATAGTGAACAAACAACACTTTCAGAGATTGTGCAATCTTCTTAAAGACCCTCTTGTTGCTGCTTCAATAGTTCATGGTGGTTCAGTTGATGAAGCAAACCTGTTTATTGAGCCAACAATCTTACTAGATCCACCACTAGATGCTGAAATCATGACAGAAGAAATCTTTGGTCCATTTCTTCCAGTGATCACAGTGAACAAAATTCAGGAAAGTATTGAATTTATAAACTCAAAACCAAAACCTCTTGCCATCTATGCATTTACCAAAGATAAAACTTTCAAGAGAAAAATTGTATCAGAAACATCCTCAGGAAGTGTCACGTTTAATGACACACTTGTTCAATTTTTATGTGATACACTACCATTTGGAGGTGTTGGACAGAGTGGTATTGGTAGGTACCACGGGAAATACTCCTTTGACACATTCAGCCATGAAAAAGCTGTAATGCATAGATACCTTTGCCTTGAAATTGAACCAAGGTATCCTCCATGGAGTAAATTTAAGCTAGAATTTATCAGATTGGCGTACAGGTTCAACTACTTTGGACTAGCACTACACATGTTGGGTTTGAAAAAACAGAACTAG 1464 0.3846 MNNNIGMEVEETVRELSQYFKTGKTKSVAWRKNQLQAVLDLVHENEDAISEALYQDLGKHPVEAYRDEIGGVEKSAQNSLISVEKWMAPKKSSMPLIFFPSKGELLPEPLGVVLIFSSWNFPIVLALDPIIGAISAGNVVLIKPSEQAPACSSFLANTLPRYLDTNAVKVVEGGGDVCEKLLQHKFDKIFFTGSPRVARIVMTSAAKNLTPVTLELGGKCPAIFDYLSNPSDFKMAVKRIVGAKWGICSGQACIGIDYVLVEEKHSSELIELLKKFVRRLYGDNMIESKVLSRIVNKQHFQRLCNLLKDPLVAASIVHGGSVDEANLFIEPTILLDPPLDAEIMTEEIFGPFLPVITVNKIQESIEFINSKPKPLAIYAFTKDKTFKRKIVSETSSGSVTFNDTLVQFLCDTLPFGGVGQSGIGRYHGKYSFDTFSHEKAVMHRYLCLEIEPRYPPWSKFKLEFIRLAYRFNYFGLALHMLGLKKQN 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02378 487 PANTHER ALDEHYDE DEHYDROGENASE 7 480 IPR012394 GO:0006081
Vifa4g02378 487 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 218 421 IPR016163 GO:0016620
Vifa4g02378 487 SUPERFAMILY ALDH-like 8 456 IPR016161 GO:0016491
Vifa4g02378 487 PIRSF ALDH 1 485 IPR012394 GO:0006081
Vifa4g02378 487 FunFam Aldehyde dehydrogenase 17 222 - -
Vifa4g02378 487 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 18 439 IPR016162 GO:0016491
Vifa4g02378 487 FunFam Aldehyde dehydrogenase 218 421 - -
Vifa4g02378 487 Pfam Aldehyde dehydrogenase family 8 441 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02378 Vifa-Chr4 716218740 716221550 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g02378 9 485 Aldehyde Dehydrogenase Gene Family AT4G36250 61.216 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02378 K00128 - gmx:100809812 829.706
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g02378 4 716218740 716221550 Vifa4g02378 4 716218740 716221550 ECH