Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02373 ATGAGTGGAATAGGAAAGACAACCATAGCTAAAAAAATGTTTGCCAAGAACTTTGCCCATTATGATAATGTGTGTTTCTTGGAAAATGTAAGCGAAGAAACAGAAAAGTTTGGACAAATGTATGTTCGTAATAAGCTTCTTAGTGAGCTACTGAAGCGAGAAATTACTGCATCTAACGTTCATGGACAACACACATTCATTAAGAGGAGGCTCAGTGGTAAAAAAAGTTTTATTGTACTTGATGATGTTGATAATGCTACACAATTAGATGATTTGTGTGGAGTACTTGACGACCTTGGACATAACAGTAGACTCATTATCACAACGAGAAACAAAGATATTCTTAGTGAAAAAGTTGATAAGATATATGAGGTCACACTATGGAAGCTTAAAGACTCTCTAAAGCTTTTTAGCTTAGGAGCCTTCCGGCAAAGCTATCCCAGAGAGGGTTACGAGCGTATCTCGGAAAGGGCAGTTGAATATGCAGGAGGTGTTCCATTAGCTTTAAAAGTTTTGGGTTTACATTTTAAATCAAAAAAACCAAAATCTTGGGTATCTGAGTTGAATGATTATGAGAACAAAGGAGAAACCTTCCCCGGGTATTCAAAAAGTGTTACAGCTAAGTTATAA 630 0.3635 MSGIGKTTIAKKMFAKNFAHYDNVCFLENVSEETEKFGQMYVRNKLLSELLKREITASNVHGQHTFIKRRLSGKKSFIVLDDVDNATQLDDLCGVLDDLGHNSRLIITTRNKDILSEKVDKIYEVTLWKLKDSLKLFSLGAFRQSYPREGYERISERAVEYAGGVPLALKVLGLHFKSKKPKSWVSELNDYENKGETFPGYSKSVTAKL 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02373 209 PRINTS Disease resistance protein signature 70 84 - -
Vifa4g02373 209 PRINTS Disease resistance protein signature 162 176 - -
Vifa4g02373 209 Gene3D - 1 123 IPR027417 -
Vifa4g02373 209 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 194 IPR027417 -
Vifa4g02373 209 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 193 IPR044974 GO:0006952
Vifa4g02373 209 Gene3D - 129 203 IPR042197 -
Vifa4g02373 209 Pfam NB-ARC domain 1 186 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02373 Vifa-Chr4 714579043 714579672 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g02373 1 180 WRKY Transcription Factor Family AT5G45050 33.149 9.93e-24 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02373 - - cam:101489032 301.212