Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02370 ATGGATTTACTTCACCAAGCAAAAACCATACTAGAACCATTCACTTCACTATTATGGATCATTCTCCCACTCACTATGTTTCTACTACTAAACCTATCCTCAAAAATCCGCAAAAGAGCACCATATCCACCAGGACCAAAAGGGTTACCCTTAATAGGTAACATGAACATGATGGACAAACTCACACATAGAGGTTTAGCAGATTTAGCCAAACAATACGGCGGCGTTTTGCACCTCCGCATGGGGTTTATCCACATGGTAGCAATCTCAAACGCAGAAGCAGCGCGTGAAGTGTTACAGCTGAATGACAATATCTTCTCAAATCGCCCAGCGACGATAGCCATAAGCTATCTCACTTATAATCGAGCGGACATGGCGTTCGCTCACTACGGTCCATTTTGGCGCCAGATGAGGAAGATTTGTGTCATGAAACTCTTCAGCCGTAAACGCGCGGAGTCGTGGGAATCTGTTAGAGATGAAGTGGACCTCGTTATCACCAACGTTAACGATAATCTGGGAAAATCTGTTAACGTTGGTGGGTTTGATCCTCAAGGTTTGAATGCTAGGCTTGTTAAGGCTCGTGGTGCGTTGGATGGCTTTATTGATAAAATTTTTGATGAACATGTTGAGAAGAAGAAGAGGAATATCAGTGGTGATGAAGATAGTGATATGGTTGATGAATTATTGGCTTTTTACAGTGATGAGGCTATAGTGAATAATGAATCGGATGATCTTCATAACTCTATCAAACTCACCAGGGATAACATCAAAGCCATCATCATGGATGTCATGTTCGGAGGAACAGAAACTGTTGCATCAGCAATGAATGACCGACGCGTGGAAGAATCAGACATAGAGAAATTGACATACCTAAAATGCATCGTCAAGGAGACGCTTCGTCTTCACCCGCCCATTCCGCTACTCCTCCACGAGACAGCAGAGGACGCTACGGTTGGTGGTTATTACGTTCCAAAAGGCTCACGCGTGATGATAAATGCGTGGGCTATTGGAAGAGATGGACTTTCATGGAAGGATTCAGAAGAGTTTCAGCCTTCAAGATTTTTAAATTCAAGTGCGCCTGATTTTAAAGGGAGTAATTTTGAGTTCATTCCGTTTGGATCGGGTCGAAGATCTTGCCCCGGAATTCAATTGGGCTTGTATGCATTGGACTTGGCGTTGGCCCATTTACTTCATTGCTTTATTTGGGAGTTACCTAATGGAATGAAGCCAAGTGAAATGGATACGAGTGATGTTTTTGGACTCACTGCGCCGAGAGCGAGTCGACTCATTGCTGTTCCAACTAAGCGTCTTACGTGCTCTCTCTGA 1326 0.4382 MDLLHQAKTILEPFTSLLWIILPLTMFLLLNLSSKIRKRAPYPPGPKGLPLIGNMNMMDKLTHRGLADLAKQYGGVLHLRMGFIHMVAISNAEAAREVLQLNDNIFSNRPATIAISYLTYNRADMAFAHYGPFWRQMRKICVMKLFSRKRAESWESVRDEVDLVITNVNDNLGKSVNVGGFDPQGLNARLVKARGALDGFIDKIFDEHVEKKKRNISGDEDSDMVDELLAFYSDEAIVNNESDDLHNSIKLTRDNIKAIIMDVMFGGTETVASAMNDRRVEESDIEKLTYLKCIVKETLRLHPPIPLLLHETAEDATVGGYYVPKGSRVMINAWAIGRDGLSWKDSEEFQPSRFLNSSAPDFKGSNFEFIPFGSGRRSCPGIQLGLYALDLALAHLLHCFIWELPNGMKPSEMDTSDVFGLTAPRASRLIAVPTKRLTCSL 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02370 441 Gene3D Cytochrome P450 35 180 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02370 441 Gene3D Cytochrome P450 181 275 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02370 441 PRINTS E-class P450 group I signature 292 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02370 441 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02370 441 PRINTS E-class P450 group I signature 332 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02370 441 PRINTS E-class P450 group I signature 369 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02370 441 PRINTS E-class P450 group I signature 379 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02370 441 PRINTS P450 superfamily signature 370 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02370 441 PRINTS P450 superfamily signature 149 162 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02370 441 PRINTS P450 superfamily signature 293 304 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02370 441 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 372 381 IPR017972 GO:0005506|GO:0016705
Vifa4g02370 441 Pfam Cytochrome P450 43 170 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02370 441 Pfam Cytochrome P450 182 275 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02370 441 Pfam Cytochrome P450 277 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02370 441 PANTHER CYTOCHROME P450 84A1-RELATED 277 441 - -
Vifa4g02370 441 SUPERFAMILY Cytochrome P450 43 436 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02370 441 Gene3D Cytochrome P450 276 428 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02370 Vifa-Chr4 712941280 712944369 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g02370 50 441 Monolignol Biosynthesis Gene Families AT4G36220 61.734 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02370 K09755 - gmx:100807448 650.973