Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02359 ATGGAGATAGCTGGCAGCTGTGAAACACCACTACCACTTCTCTCACTGAATCATGTCTCTATATTGTGCAGATCTGTGCTGGACTCTATGAGGTTTTATGAGGAAGTTTTGGGTTTTGGTCTCATCAAACGCCCTTCCTCTTTCAAATTCAATGGAGCCTGGTTGTACAACTACGGTTTTGGAATACACCTGCTAGAGAATCCAAACTATGATGCATTTGATAACCCTATGTATGAACCACGACCCATTAATCCCAAGGACAATCACATATCATTCCAGTGTACAGATGTTGAACTTGTGAAAATGAGGTTGGAAGAAATGGGGATGAAGTATGTTACAGCTTTGGTAGAAGATGAAGGAATCAAGGTGGAGCAGGTGTTCTTCCATGACCCAGATGGATACATGATAGAACTTTGCAACTGTGAGAATATCCCAATAGTGCCTATTTCTTCTTCTTCGTGCTCTTTCAAGGCAAGAAGCCAGAGCATTAAGAAGGCTCCCAGCAAATGTGGTTTCATGGAAAATGTTATGATGCGAAGCTTGAGCATGGATATGATGAACTTTGCGTTTTAA 573 0.4154 MEIAGSCETPLPLLSLNHVSILCRSVLDSMRFYEEVLGFGLIKRPSSFKFNGAWLYNYGFGIHLLENPNYDAFDNPMYEPRPINPKDNHISFQCTDVELVKMRLEEMGMKYVTALVEDEGIKVEQVFFHDPDGYMIELCNCENIPIVPISSSSCSFKARSQSIKKAPSKCGFMENVMMRSLSMDMMNFAF 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02359 190 Gene3D - 10 143 IPR029068 -
Vifa4g02359 190 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 15 141 IPR037523 -
Vifa4g02359 190 CDD VOC_like 16 138 - -
Vifa4g02359 190 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 16 138 IPR004360 -
Vifa4g02359 190 PANTHER - 9 165 - -
Vifa4g02359 190 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 11 140 IPR029068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02359 Vifa-Chr4 710463772 710464523 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g02359 29 152 Calmodulin-binding Proteins AT1G08110 26.490 3.83e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02359 - - mtr:11423798 295.049