Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02346 ATGGCCATTAGAATATCCAACAAGCTACCTCAACCTGATGTTATTATTAAGCAAATTCTCAAAAGATGTTCAAGCTTTGGCAAAAAACAAGGTTACAATGAAGAGGGTCATCCTGAAGATGTACCAAAAGGCCACTTTGTTGTTTACGTTGGAGAAAATAGAACAAGATATATTGTTCCAATTTCATGGCTGCCTCATCCACAGTTTCAATGTTTGCTTCAAATAGCTGAGGAAGAATTTGGATTCAATCATGACATGGGACTTACAATTCCTTGTGACGAACTTGTTTTTGAATATCTTACTTCCTTGATCAGATAA 318 0.3585 MAIRISNKLPQPDVIIKQILKRCSSFGKKQGYNEEGHPEDVPKGHFVVYVGENRTRYIVPISWLPHPQFQCLLQIAEEEFGFNHDMGLTIPCDELVFEYLTSLIR 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02346 105 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 38 102 IPR003676 GO:0009733
Vifa4g02346 105 Pfam Auxin responsive protein 28 104 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02346 Vifa-Chr4 706988523 706988840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g02346 20 104 Calmodulin-binding Proteins AT3G43120 45.882 4.16e-19 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02346 K14488 - gmx:100500218 179.874