Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02332 ATGCTCTCAATATCTTTCCCCTCACCTCTCAGCGCTCTCTCGGGCAAAACCATCTCATCAAAACCGTGCCACGTCAGACCGCGGAGAGTTTTCGTTTCTGCCACCTCCACCAGAACAGAAGCTATATCTACTCAGCTTCCCCGCGGCATGGCTTCCTGTTCCCTTTACGAGATTCTTGGAATTGCGGCTGCTGCTTCAGGTCAGGATATTAAGGCAGCGTACCGGCGACTCGCGAGAGTTTCGCATCCTGATGTGGCGGCGGTTGGTCGGAAGAAATCTTCGGCGGATGAGTTCATGAAGATTCATGCTGCGTACTCGACTCTGTCGGATCCGGAGAAGCGTGCGAGATATGATAGAAGTTTGCTCCTGCGTCGGCAACCGCTGACGGCGAGGAGATTTCCTGGATATAGTTGTCAGAACTGGGAGACAGATCAGTGCTGGTAG 444 0.5338 MLSISFPSPLSALSGKTISSKPCHVRPRRVFVSATSTRTEAISTQLPRGMASCSLYEILGIAAAASGQDIKAAYRRLARVSHPDVAAVGRKKSSADEFMKIHAAYSTLSDPEKRARYDRSLLLRRQPLTARRFPGYSCQNWETDQCW 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02332 147 SMART dnaj_3 53 113 IPR001623 -
Vifa4g02332 147 ProSiteProfiles dnaJ domain profile. 54 121 IPR001623 -
Vifa4g02332 147 Pfam DnaJ domain 55 118 IPR001623 -
Vifa4g02332 147 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 20 127 - -
Vifa4g02332 147 CDD DnaJ 56 110 IPR001623 -
Vifa4g02332 147 ProSitePatterns Nt-dnaJ domain signature. 98 117 IPR018253 -
Vifa4g02332 147 SUPERFAMILY Chaperone J-domain 50 124 IPR036869 -
Vifa4g02332 147 Gene3D DnaJ domain 45 131 IPR036869 -
Vifa4g02332 147 PRINTS DnaJ domain signature 74 89 IPR001623 -
Vifa4g02332 147 PRINTS DnaJ domain signature 93 113 IPR001623 -
Vifa4g02332 147 PRINTS DnaJ domain signature 56 74 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02332 Vifa-Chr4 701675216 701675659 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g02332 56 123 C2H2 Transcription Factor Family AT1G74250 43.836 6.05e-10 54.7