Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02317 ATGGGTTCTATTGAAATTCAAAGTTCACAACCTGAGGTAGTCACCGTTGATGTGCTTGCAGCCAAAACTGTGGAAGAGTTTCAGAAAGGGCACGTGGATTCAGAGAAGATCATTAATATTGCATACATGTTTAATACACCTGAAGGAAGGGTGAAGAACCCAGATTTTCTGAAGGAGGTTTTGTCTCTTTGCAAGAAAGAAGATCATCTCATTGTGGGTTGCCAAAGTGGAGTGAGATCTGTCTATGCAACTGTTGATCTTCTGGCTGAAGGCTTTAAGGATGTCTCCAACATGGGTGGAGGTTATCTGGATTGGGTTAAAAAGGAATTTCCTATTAAGATACATGTCACTAAATAG 357 0.4062 MGSIEIQSSQPEVVTVDVLAAKTVEEFQKGHVDSEKIINIAYMFNTPEGRVKNPDFLKEVLSLCKKEDHLIVGCQSGVRSVYATVDLLAEGFKDVSNMGGGYLDWVKKEFPIKIHVTK 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02317 118 CDD RHOD 10 106 - -
Vifa4g02317 118 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 9 113 IPR036873 -
Vifa4g02317 118 SMART rhod_4 9 111 IPR001763 -
Vifa4g02317 118 Gene3D - 5 113 IPR036873 -
Vifa4g02317 118 Pfam Rhodanese-like domain 13 107 IPR001763 -
Vifa4g02317 118 ProSiteProfiles Rhodanese domain profile. 9 114 IPR001763 -
Vifa4g02317 118 PANTHER THIOSULFATE SULFURTRANSFERASE 18 21 114 IPR044684 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02317 Vifa-Chr4 697037634 697038648 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g02317 13 114 Sulfurtransferasese or Rhodanese AT2G17850 55.238 4.66e-39 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02317 - K15692 gmx:100792251 193.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g02317 4 697037634 697038648 Vifa4g02317 4 697037634 697038648 ECH
Vifa1g06463 1 1003863189 1003864458 Vifa4g02317 4 697037634 697038648 PCT