Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02245 ATGAGAACCTTAAGAAGCTTCGATGGCTTCCCTTTAAATTTGAGCAACTTCTATGGTGGCTGCGCTATTCTTCTTCTTCTTCTTGTTGTTGTTGTTACTTTATTGTTTCTTCTGAACCGTAAGAGCAGATCCCTGTTGGCGTCCTCTTTGATCTCCGATTCTAGCAATTTAAACCCAAGGGTTTACAATTGCAGAACCTCAAACACTGTCACTGATGCTGATTTGAAGTTTTTAATGGATGAAATTCTAAATCAGAACCATAAATGGGAGGATGTCATAGATAAAACAAATCATCATCTATGCTACAAAGCTAAATCCACCAAACCTAAGAATGGTCCCCTGAAATATTGGAGTATGACTGTGTTCAATGATATTTCCGATGAGATGCTAAGAAACTTCTACATGGACAATCACTACAGAAAGCAATGGGATAACACTGTGGTGGAACACAATCAGCTGCAGCTGGATGAATCTGATGGTTCTGAAGTTGGTCGTACAGGTCAGACTCCATTGTTTCCTCGTATTTTTGGTCATGAAGCTGGAGGGATCGTGGAGAGCGTAGGTGAAGGTGTGACTCATCTGAAACCAGGGGATAAAGCCCTGCCTGTATTCACAGGGGAGTGTGGTGAATGTCCACATTGTAAGTCAGAGGAGAGCAACATGTGTGATCTTCTTAGGATCAACACTGACAGAGGTGTCATGCTCAATGATAACAAGTCTAGATTCTCTATCAATGGAGAGCCCATAAACCATTTCGTGGGCACCTCTACATTCAGTGAGTACACAATGGTTCATGCTGGATGTGTTGCAAAGATCAATCCTGAAGCACCACTTGACAAAGTTTGTATTCTCAGTTGTGGAATATGCACAGGTCTTGGTGCTACTGTGAATGTTGCAAAACCAAAGCCAGGTTCTTCAGTTGCTATCTTTGGGCTTGGAGTTGTTGGCCTTGCTGCTGCTGAAGGTGCAAGGATCTCTGGTGCATCAAGAATCATTGGAGTTGATTTAGTTTCCAGCCGATTTGAATTAGCTAAGAAGTTTGGAGTGAATGAGTTCGTGAACCCGGAAGTAGATTAA 1077 0.4225 MRTLRSFDGFPLNLSNFYGGCAILLLLLVVVVTLLFLLNRKSRSLLASSLISDSSNLNPRVYNCRTSNTVTDADLKFLMDEILNQNHKWEDVIDKTNHHLCYKAKSTKPKNGPLKYWSMTVFNDISDEMLRNFYMDNHYRKQWDNTVVEHNQLQLDESDGSEVGRTGQTPLFPRIFGHEAGGIVESVGEGVTHLKPGDKALPVFTGECGECPHCKSEESNMCDLLRINTDRGVMLNDNKSRFSINGEPINHFVGTSTFSEYTMVHAGCVAKINPEAPLDKVCILSCGICTGLGATVNVAKPKPGSSVAIFGLGVVGLAAAEGARISGASRIIGVDLVSSRFELAKKFGVNEFVNPEVD 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02245 358 Pfam Alcohol dehydrogenase GroES-like domain 169 271 IPR013154 -
Vifa4g02245 358 SUPERFAMILY GroES-like 168 295 IPR011032 -
Vifa4g02245 358 ProSiteProfiles START domain profile. 78 163 IPR002913 GO:0008289
Vifa4g02245 358 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 277 355 IPR036291 -
Vifa4g02245 358 FunFam S-(hydroxymethyl)glutathione dehydrogenase 291 358 - -
Vifa4g02245 358 PANTHER ALCOHOL DEHYDROGENASE 164 356 - -
Vifa4g02245 358 SUPERFAMILY Bet v1-like 72 158 - -
Vifa4g02245 358 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 177 191 IPR002328 GO:0008270|GO:0016491
Vifa4g02245 358 Gene3D - 291 356 - -
Vifa4g02245 358 Gene3D - 162 290 - -
Vifa4g02245 358 FunFam alcohol dehydrogenase 1-like isoform X1 145 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02245 Vifa-Chr4 683343092 683344836 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g02245 172 353 Monolignol Biosynthesis Gene Families AT1G72680 26.776 3.97e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02245 K18857 - gmx:100801918 355.14