Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02148 ATGTCTTCTTCTTCTTGTTCTCGTTATCCTATTATGAACAGTACCTTGTTTTCTCTGTTTCTTTTTGTGCTTATTGCAAAAGTTAGCTTTTGCTTTACCACCAAGGTTTATGTTGTTTATATGGGAAGCAAAATTGGTGAACATGAACACCCAGATGATATTTTGAAGGAAAATCATCAAATACTTGCTTCTGTTCATAGTGGAAGTATTGAACTAGCACAAGCTTCTCATGTTTATAGCTATAGACATGGTTTTAGAGGGTTTGCAGCTAAGCTCAGTGATGAACAAGCTTCACAAATTTCTAAAATTGCAGGAGTGGTTTCTGTTTTTCCAAATTCTAAAAGAAAGCTTCACACAACTCATTCATGGGATTTCATGGGACTTTTGGATGACCAAACCATGGAAACTCTTGGCTACTCTATTAAAAACCAAGAAAATATCATCATTGGTTTCATTGATACTGGAATTTGGCCAGAATCTCCGAGTTTCAGTGACACCGACATGCCAGCAGTGCCACCAGGGTGGAAAGGTCAATGTCAATCAGGAGAAGCATTCAATGCCTCAACTTGCAACAGGAAAGTGATAGGTGCAAGATACTATATAAGTGGATACGAAGCAGAAGAAGAGTCAAACGAAAAAGTCTCGTTCAAATCGGCTAGGGACAGCACTGGTCATGGTAGCCATACAGCTTCTATAGCCGCAGGGAGATACGTAGAAAACATGAACTATAAAGGACTAGCAAGTGGAGGTGCGAGAGGAGGTGCACCAACGGCTAGGATTGCTGTATACAAAACATGTTGGGATTCAGGCTGCTATGATGCGGACTTGTTAGCTGCATTTGATGATGCTATAAGAGATGGAGTTCACATTTTGTCTTTATCACTCGGAGCTCAATCGCCACAAGGAGATTATTTCAACGATGCTATATCTATAGGGTCGTTCCACGCTGCTAACCGCGGAGTGCTTGTTGTTTCGTCTGCGGGAAATGAAGGAATTCCGGGTTCTGCTACTAATCTTGCACCATGGATGCTTACAGTTGCTGCTAGCTCAACTGATAGGGATTTCACTTCTGATATCTTGTTAGGAAACGGTGCAAAAGTCACGGGTGAAAGTCTGAGTCTGTTTGAAATGAATACATCATCAAGGATAATTTCGGCTTCTCAAGCATTTGCGGGATACTTCACTCCTTATCAATCCAGTTACTGTTTAGAGAGTTCTTTGAATAAAACAAAGACCAAAGGGAAGGTTCTAGTTTGTAGAAATGTAGAGAGTTCAACAGATTCAAAGGTGAAAAAGAGCAAAATAGTTAAAGAAGCTGGTGGAGTTGGCATGATACTTATTGATGAGACAGGTCAAGATGTTGCTATCCCATTTTTGATCCCTTCTGCTATTGTCGGAAAGAAAACAGGCGAAAAGATTCTATCCTATCTCAAAACTACACGTAAGCCGATGTCAAGGATATTACGAGCAAAGACAGTAATAGGGGCTCAACCAGCACCGCGCGTTGCAGCATTTTCTTCTAGAGGTCCTAATGCTCTAAGCCCTGAAATTTTGAAGCCTGATATCACAGCTCCAGGAATAAACATTCTTGCAGCATGGTCTCCAGCAACCGGAAACATGTTCAACATTCTCTCCGGAACTTCTATGGCATGTCCTCACGTAACCGGAATCGCAACCTTAGTCAAAGCTGTTCATCCTTCATGGTCTCCATCTGCCATTAAATCCGCCATCATGACAACTGCAACAATCCTCGATAAGCGCCACAAACCGATCAGCGTAGATCCAGAACAAACAAGGGCTAATGCATTCGATTACGGATCAGGGTTTTTGAACCCTGCAAGAGTTCTTGACCCTGGTCTCGTTTATGATTCCAAACCAACAGATTTTATCGCATTCCTATGCTCACTCGGTTACGATCAAAGATCACTTCATCTAGTAACTAGAGACAACAGCACATGTAATAGCATTAGTACATTCAACACTGCATCAGACCTCAACCATCCATCCATTTCAGTTCCTAATCTCAGAGACAGCTTTTCAGTTACAAGGGTTGTGACAAATGTTGGAAAAGCAACAAGTATATATAAATCTATAGTTTCTTCACCACCTGGTGTCAATGTCACCGTTACGCCGAACCGGTTAGTTTTCACAAGAATGGGACAGAAAATCAAGTTCAGTGTGAATTTCAAAGTAACTTCTCCTTCAAAAGGATACAAATTTGGATTCTTGTCATGGAAAAATAAAAGATTACAAGTTACTAGTCCTTTGGTTGTAAAGGTTGGTTAG 2286 0.4099 MSSSSCSRYPIMNSTLFSLFLFVLIAKVSFCFTTKVYVVYMGSKIGEHEHPDDILKENHQILASVHSGSIELAQASHVYSYRHGFRGFAAKLSDEQASQISKIAGVVSVFPNSKRKLHTTHSWDFMGLLDDQTMETLGYSIKNQENIIIGFIDTGIWPESPSFSDTDMPAVPPGWKGQCQSGEAFNASTCNRKVIGARYYISGYEAEEESNEKVSFKSARDSTGHGSHTASIAAGRYVENMNYKGLASGGARGGAPTARIAVYKTCWDSGCYDADLLAAFDDAIRDGVHILSLSLGAQSPQGDYFNDAISIGSFHAANRGVLVVSSAGNEGIPGSATNLAPWMLTVAASSTDRDFTSDILLGNGAKVTGESLSLFEMNTSSRIISASQAFAGYFTPYQSSYCLESSLNKTKTKGKVLVCRNVESSTDSKVKKSKIVKEAGGVGMILIDETGQDVAIPFLIPSAIVGKKTGEKILSYLKTTRKPMSRILRAKTVIGAQPAPRVAAFSSRGPNALSPEILKPDITAPGINILAAWSPATGNMFNILSGTSMACPHVTGIATLVKAVHPSWSPSAIKSAIMTTATILDKRHKPISVDPEQTRANAFDYGSGFLNPARVLDPGLVYDSKPTDFIAFLCSLGYDQRSLHLVTRDNSTCNSISTFNTASDLNHPSISVPNLRDSFSVTRVVTNVGKATSIYKSIVSSPPGVNVTVTPNRLVFTRMGQKIKFSVNFKVTSPSKGYKFGFLSWKNKRLQVTSPLVVKVG 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02148 761 FunFam Subtilisin-like protease SBT1.5 633 761 - -
Vifa4g02148 761 CDD Peptidases_S8_3 116 582 IPR034197 -
Vifa4g02148 761 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 32 118 IPR037045 -
Vifa4g02148 761 Gene3D - 352 494 - -
Vifa4g02148 761 Pfam Fibronectin type-III domain 664 758 IPR041469 -
Vifa4g02148 761 SUPERFAMILY Subtilisin-like 117 620 IPR036852 GO:0004252|GO:0006508
Vifa4g02148 761 CDD PA_subtilisin_like 358 487 - -
Vifa4g02148 761 ProSiteProfiles Serine proteases, subtilase domain profile. 122 616 - -
Vifa4g02148 761 Gene3D - 633 760 - -
Vifa4g02148 761 FunFam subtilisin-like protease SBT1.5 352 494 - -
Vifa4g02148 761 ProSitePatterns Serine proteases, subtilase family, serine active site. 546 556 IPR023828 -
Vifa4g02148 761 FunFam Subtilisin-like protease SBT1.5 146 361 - -
Vifa4g02148 761 Pfam PA domain 390 473 IPR003137 -
Vifa4g02148 761 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 38 758 IPR045051 -
Vifa4g02148 761 FunFam Subtilisin-like protease SBT5.3 26 118 - -
Vifa4g02148 761 Pfam Subtilase family 145 584 IPR000209 GO:0006508|GO:0008236
Vifa4g02148 761 Pfam Peptidase inhibitor I9 36 118 IPR010259 -
Vifa4g02148 761 PRINTS Subtilisin serine protease family (S8) signature 144 163 IPR015500 -
Vifa4g02148 761 PRINTS Subtilisin serine protease family (S8) signature 221 234 IPR015500 -
Vifa4g02148 761 PRINTS Subtilisin serine protease family (S8) signature 545 561 IPR015500 -
Vifa4g02148 761 Gene3D Peptidase S8/S53 domain 146 629 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02148 Vifa-Chr4 661316199 661320258 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g02148 37 760 Subtilisin-like Serine Gene Family AT2G04160 43.461 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02148 - - gmx:100819201 1287.32