Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa4g02147 | ATGATCATTGATATGCCACCATCCATGGCTCAAAATTCCCGCTCAAGCAGATCTTCCTTTAGTTCTAACAATGGCACTGAGAATACTCTTGTCAACAACTACACTGCTGTTAGTATTGCCGATGATTCTGATTGTGATAGCTCAAATTTAGCACCATCAACTCCATCGACTCTGTCAATGGCTGTTCCAGCAGAACTTGCTGGAGCTATACCCTTGATTGACAAATTTCAGGTGGATGGATTTTTAAAAATGATGCATAAACAAATTCAATCTGCTGGGAAACGTGGTTTTTTTTCTAAAAGATCTTCAGATCCCCAAGCTCGTGAGAAATTTACATTTGAGGACATGCTTTCTTTTCAAAAGGATCCAATACCAACGGCATTGCTTAAGATTAATGGTGACTTAGTAAGTCGCGCGACAAAATTATTCCAGATGATTTTGAAGTATACCGGAGTTGTTGAGTCTTCTGATTGTGCAACTCCATTAAGCTTAGATGAACGAGTTGAGCTTGTTGAGAAACTATACAAGCATAGTTTGAAACGATCAGAACTTCGAGATGAGCTTTTTATTCAAATATCAAAACAAACAAGAAATAACCCTGATAGGCAATACTTGATCAAGTCATGGGAGCTTATGTATGTATGCGCATCCTCCATGTCCCCTAGTAAAGATATTGCAGTTTATTTGTCGGAATACGCTCATAACATAGCACATAGTGTTTCTACTGATTCCGAGATTCAAGCCCTTGCATTAAATTCGTTGAATGCTTTGAAGCGTTCTGTTAAGGCTGGTTCTAGACATGTAATACCTGGACGTGAAGAGATTGAAGCTTTGTTGACAGGGATAAAGCTTACAAATGTAGTGTTCTTCTTAGATGAAACATTTGAAGAAATTACGTACGACATGTCAACAACAGTCGCTGACGCTGTCGAGGAACTCGCAGGGCTCATTAAACTGTCTACATACTCTAGTTTTAGTCTGTTTGAATGTCGTAAAGTTATTACAAGTTCCAAATCATCTGATCCTGGGAATGAGGAGTACATTGGATTAGATGATAACAAATACATTGGGGATCTCCTGGCGGGCTTTAGAGCAGCCAAAGATCGAAATAAGGGAGATACTTTGCACTGTAAACTGATATTCAAGAAAAGGCTTTTTCGTGAATCTGATGAAGCTGTGACAGATCCAATGTTTGTGCAGTTGTCCTATGTACAATTGCAGCATGATTATATTTTGGGTAATTATCCTGTTGGAAAGGATGATGCTGCTCAGCTTTCTGCATTACAAATCCTGGCTGAGATTGGATCTGTTAGCACACCTGAATCATGCACTAACTGGAATTCACTTCTGGAGCGATTTCTTCCTAGACAAATTTCAATGACTCGAGCAAGACGTGAATGGGAGTTTGATATTCTTTCTCGATATCATTCATTGGAGCATCTGACAAAATATGACGCAAGACAACAATTTCTGCGTATATTGAGAGCCCTTCCTTATGGAAATTCTGTTTTCTTCAATGTTCGCAAGATTGATGATCCTATTGGACTCTTGCCTGGACGGATAATACTTGGAATCAATAAAAGAGGGATTCATTTTTTTCGTCCAGTTCCTAAGGAATATTTGCACTCAGCTGAGTTAAGAGACATAATGCAATTTGGTAGCAGCAATACGGCAGTCTTTTTCAAAATGCGAGTAGCCGGTGTTCTTCACATATTCCAATTTGACACCAAGCAGGGTGAAGAAATTTGCGTAGCTCTTCAGACACATATAAATGATGTAATGTTGCGCCGCTATTCGAAAACACGATCTTCTAGTGGCAGCAGTTCTTTGAATGGTGATGTTTCTAATAATTTAAAGCCTCCTAGTTCAGAAACATATGAGAAGCGAATTCAAGATTTATCTAAACTTGCTGAAGAATCTCAAAGAAATGTTGATCAATTGCATAAAGAATTGCGTGAGAAGGAGGAACAGGAAGAAGAATTGCAAGAACAGGTGCATGGTTTGAAGGAATCCTTAAAAGCTAATAAGCAAAATCTCGAGGCAGTTACAAGTGACCGGGAAAGGCTTAGGTTATTATGCAGTAAAAAAGATCTGGCGCTGCAGGTTATAGAGAACGATTCCAAAAAGGATCTTGTTGAAACAAATAACCAAGTGCTACAAAAGCTTAAGTATGAGCTAAAACATTATAAAGATGAGCTGCATTCAGCTGAGGAAATCATCGAAACCTTGACAAGCGAAAAAAAGATTTTAGAACAGAAACTGTCTGTGCTTGAGAAGAGGAATGCTGAAGAGAGTAATTCTCTTCAACGAAAACTTGAGCAAGAACGCAAAGCGGTGAAGTCTGAAGTGTATGACCTTGAAAGAAAGCTAGAAGGGTATAGACAAGAACTAATGGCGGCTAAGTCTATTATTTCAGTCAAGGACTCTGAGTTGACCACACTGAACAATAATCTCAAGGAACTTGAAGAATTGCGAGAAATGAAAGAGGATATTGATAGAAAGAATGAACAGACAGCTGCCATATTGAAGATGCAAGGAGCTCAACTAGCTGAGATGGAAACTCTTTACAAGGAAGAACAGGTTTTAAGAAAGCGTTATTTTAATGTTATAGAAGATATGAAAGGCAAGATCAGAGTTTATTGCAGGCTAAGACCTCTTAGTGACAAAGAGATTGCTGAAAAAGAAAGAGAAGCTGTTATTGCGGTAGATGAGTTTACTGTTGAGTTCCTTTGGAAAGACGATAAGCCAAAGCAGTACATATATGATCGTGTTTTTGGTGGTGATGCAACTCAAGAAACCGTATTTGAGGATACCAGGTATTTGGTGCAATCTGCCGTAGATGGTTTTAATGTGTGCATATTTGCTTATGGGCAAACTGGCTCCGGAAAGACATTTACAATCTATGGATCGGAAGACAACCCTGGACTTACACCTCGGGCAATTGCCGAACTTTTTAGAATTTTAAGGAGAGATGGTAACAAATATTCATTTTCGTTGAAGGCATACATGGTGGAATTATATCAAGATACACTTTTAGATCTTTTACTACCTAAGAATGCAAAGCATTCAAGATTGGATATCAAGAAGGATTCGACGGGAATGGTTGTTGTGGAAAACACAACAGTCGTGTCAATTTCTACAATTGAAGAACTGAATAATATAATACATAAGGGATCCGAACGACGGCATATATCAGGAACGCAAATGAATGCAGAAAGTTCGAGGTCTCATCTCATTCTTTCAATAGTAATTGAAAGTACAAACCTTCAAAGTCAGTCTGTTGCAAGGGGAAAGCTGAGTTTCGTTGATCTTGCTGGTTCAGAAAGAGTGAAAAAGTCGGGTTCTATGGGTAGTCAATTGAAGGAAGCACAGAGTATCAACAAATCGTTATCAGCGCTCGGAGATGTGATAAGTTCCTTGTCGTCTGGTGGTCAACACACACCTTATAGGAATCACAAGTTAACTATGTTGATGAGTGATTCACTTGGTGGTAATGCGAAAACTCTCATGTTTGTCAATGTTTCTCCAATAGAATCAAGCTTAGACGAGACTCATAACTCTCTCATGTATGCGTCGAGAGTTAGATCAATTGTAAATGATCCTAGCAAAAATGTGAGTTCAAAAGAAATAGCACGGTTAAAGAAGTTGGTTGCATATTGGAAACAACAAGCTGGTAGAGCAGAGAATGAAGATTTAGAAGAAATTCAAGAAGAAAGATTACCTAAAGAGAGACCAGATAGTCATGGTAGCTCTAGATATAGTCTAGGTTAA | 3771 | 0.3858 | MIIDMPPSMAQNSRSSRSSFSSNNGTENTLVNNYTAVSIADDSDCDSSNLAPSTPSTLSMAVPAELAGAIPLIDKFQVDGFLKMMHKQIQSAGKRGFFSKRSSDPQAREKFTFEDMLSFQKDPIPTALLKINGDLVSRATKLFQMILKYTGVVESSDCATPLSLDERVELVEKLYKHSLKRSELRDELFIQISKQTRNNPDRQYLIKSWELMYVCASSMSPSKDIAVYLSEYAHNIAHSVSTDSEIQALALNSLNALKRSVKAGSRHVIPGREEIEALLTGIKLTNVVFFLDETFEEITYDMSTTVADAVEELAGLIKLSTYSSFSLFECRKVITSSKSSDPGNEEYIGLDDNKYIGDLLAGFRAAKDRNKGDTLHCKLIFKKRLFRESDEAVTDPMFVQLSYVQLQHDYILGNYPVGKDDAAQLSALQILAEIGSVSTPESCTNWNSLLERFLPRQISMTRARREWEFDILSRYHSLEHLTKYDARQQFLRILRALPYGNSVFFNVRKIDDPIGLLPGRIILGINKRGIHFFRPVPKEYLHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFDTKQGEEICVALQTHINDVMLRRYSKTRSSSGSSSLNGDVSNNLKPPSSETYEKRIQDLSKLAEESQRNVDQLHKELREKEEQEEELQEQVHGLKESLKANKQNLEAVTSDRERLRLLCSKKDLALQVIENDSKKDLVETNNQVLQKLKYELKHYKDELHSAEEIIETLTSEKKILEQKLSVLEKRNAEESNSLQRKLEQERKAVKSEVYDLERKLEGYRQELMAAKSIISVKDSELTTLNNNLKELEELREMKEDIDRKNEQTAAILKMQGAQLAEMETLYKEEQVLRKRYFNVIEDMKGKIRVYCRLRPLSDKEIAEKEREAVIAVDEFTVEFLWKDDKPKQYIYDRVFGGDATQETVFEDTRYLVQSAVDGFNVCIFAYGQTGSGKTFTIYGSEDNPGLTPRAIAELFRILRRDGNKYSFSLKAYMVELYQDTLLDLLLPKNAKHSRLDIKKDSTGMVVVENTTVVSISTIEELNNIIHKGSERRHISGTQMNAESSRSHLILSIVIESTNLQSQSVARGKLSFVDLAGSERVKKSGSMGSQLKEAQSINKSLSALGDVISSLSSGGQHTPYRNHKLTMLMSDSLGGNAKTLMFVNVSPIESSLDETHNSLMYASRVRSIVNDPSKNVSSKEIARLKKLVAYWKQQAGRAENEDLEEIQEERLPKERPDSHGSSRYSLG | 1256 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa4g02147 | 1256 | SMART | MyTH4_1 | 119 | 279 | IPR000857 | GO:0005856 | |
Vifa4g02147 | 1256 | FunFam | Kinesin-like calmodulin-binding protein | 820 | 1199 | - | - | |
Vifa4g02147 | 1256 | ProSiteProfiles | FERM domain profile. | 284 | 598 | IPR000299 | GO:0005856 | |
Vifa4g02147 | 1256 | Pfam | Kinesin motor domain | 882 | 1197 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Vifa4g02147 | 1256 | FunFam | Kinesin-like calmodulin-binding protein (ZWICHEL) | 283 | 386 | - | - | |
Vifa4g02147 | 1256 | Gene3D | - | 1200 | 1247 | - | - | |
Vifa4g02147 | 1256 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 876 | 1227 | IPR027417 | - | |
Vifa4g02147 | 1256 | SMART | B41_5 | 280 | 504 | IPR019749 | - | |
Vifa4g02147 | 1256 | SUPERFAMILY | Prismane protein-like | 819 | 880 | IPR011254 | GO:0003824|GO:0016491 | |
Vifa4g02147 | 1256 | CDD | KISc_C_terminal | 874 | 1199 | - | - | |
Vifa4g02147 | 1256 | MobiDBLite | consensus disorder prediction | 1226 | 1249 | - | - | |
Vifa4g02147 | 1256 | PRINTS | Kinesin heavy chain signature | 1098 | 1116 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Vifa4g02147 | 1256 | PRINTS | Kinesin heavy chain signature | 1067 | 1084 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Vifa4g02147 | 1256 | PRINTS | Kinesin heavy chain signature | 1147 | 1168 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Vifa4g02147 | 1256 | PRINTS | Kinesin heavy chain signature | 948 | 969 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Vifa4g02147 | 1256 | Gene3D | - | 502 | 610 | IPR011993 | - | |
Vifa4g02147 | 1256 | Gene3D | - | 387 | 498 | IPR014352 | - | |
Vifa4g02147 | 1256 | Gene3D | MyTH4 domain | 97 | 280 | IPR038185 | - | |
Vifa4g02147 | 1256 | MobiDBLite | consensus disorder prediction | 1224 | 1256 | - | - | |
Vifa4g02147 | 1256 | SUPERFAMILY | Second domain of FERM | 382 | 499 | IPR035963 | - | |
Vifa4g02147 | 1256 | ProSitePatterns | Kinesin motor domain signature. | 1097 | 1108 | IPR019821 | GO:0003777|GO:0005524|GO:0007018 | |
Vifa4g02147 | 1256 | Gene3D | Kinesin motor domain | 818 | 1198 | IPR036961 | - | |
Vifa4g02147 | 1256 | MobiDBLite | consensus disorder prediction | 602 | 624 | - | - | |
Vifa4g02147 | 1256 | ProSiteProfiles | MyTH4 domain profile. | 119 | 279 | IPR000857 | GO:0005856 | |
Vifa4g02147 | 1256 | ProSiteProfiles | Kinesin motor domain profile. | 876 | 1197 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Vifa4g02147 | 1256 | FunFam | Kinesin-like calmodulin-binding protein (ZWICHEL) | 502 | 611 | - | - | |
Vifa4g02147 | 1256 | SUPERFAMILY | PH domain-like | 504 | 592 | - | - | |
Vifa4g02147 | 1256 | MobiDBLite | consensus disorder prediction | 8 | 26 | - | - | |
Vifa4g02147 | 1256 | Pfam | FERM central domain | 390 | 504 | IPR019748 | - | |
Vifa4g02147 | 1256 | CDD | FERM_B-lobe | 399 | 497 | IPR019748 | - | |
Vifa4g02147 | 1256 | Coils | Coil | 1210 | 1230 | - | - | |
Vifa4g02147 | 1256 | CDD | FERM_C_KCBP | 501 | 602 | - | - | |
Vifa4g02147 | 1256 | Coils | Coil | 804 | 841 | - | - | |
Vifa4g02147 | 1256 | PANTHER | MYOSIN VII, XV | 4 | 151 | - | - | |
Vifa4g02147 | 1256 | FunFam | Kinesin-like calmodulin-binding protein (ZWICHEL) | 98 | 281 | - | - | |
Vifa4g02147 | 1256 | Coils | Coil | 712 | 796 | - | - | |
Vifa4g02147 | 1256 | Coils | Coil | 623 | 678 | - | - | |
Vifa4g02147 | 1256 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Vifa4g02147 | 1256 | SMART | kinesin_4 | 874 | 1205 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Vifa4g02147 | 1256 | FunFam | Kinesin-like calmodulin binding protein | 387 | 498 | - | - | |
Vifa4g02147 | 1256 | Pfam | MyTH4 domain | 172 | 277 | IPR000857 | GO:0005856 | |
Vifa4g02147 | 1256 | Gene3D | - | 283 | 386 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa4g02147 | Vifa-Chr4 | 660501745 | 660509408 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa4g02147 | 53 | 1247 | Calmodulin-binding Proteins | AT5G65930 | 71.159 | 0.0 | 1749 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa4g02147 | - | - | adu:107475586 | 1917.89 |