Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02141 ATGGTCTTCGGCAAACCCCCCGGCGGCAAAGGCAACCTCCGTATCTCATCTTCCCTTCAAGATCTCACCTCCTACCGCCACCTAGATCCCCAATACTCAATCCCAACCCTCAATTCCATCAACCAACAACAGCAGCAGCAACAACAACAACTGCTTCAAAATTCAACTTTCTCCAAAACCAAACCAACCCAAACCTTAACCCCAGCCCATAAAAAATGGGCCAGGCCCATCACACTCTCCATATGCTTCTTCATTCTCCTCATTCTCATCATCTACACAATCTCATCACTTTATTCTCACCATTCCGGTAAATACTACGTCGTTTTGGATTGTGGTAGCACCGGAACTCGTGTTTACGTTTACAAAGCCGAACTTCAAACTAAACAAGATACTCCTTTTCCTATTTCCGTAACTTCGTTGCGAAACGGGTTGCAGAAAAAACGAAACTCGCTGAGCGGTCGTGCTTACGATCGAATGGAAACTGAACCGGGTCTTGATAAACTGGTTCATAATGTAACCGGTTTGAAAGCTGCATTGAAACCGCTTCTCAAATGGGCTATGAAACAGATTCCGGTAGGTGCTCATAAGAGTACTTCGCTTTTTCTTTATGCTACTGCTGGTGTTAGGCGGCTTCCCAACGAGGATTCGAAATGGTTGCTTCAGAATGCTTGGACTGTTCTTAAAGGTTCTTCTTTTGTTTGTAGGAAAGAGTGGGTTAAGATTATTACTGGGACCGAGGAAGCTTATTTTGGGTGGATTGCTTTGAATTATGATAATGGGGTTTTGGGTGTTAAGCCTAGGAAAGCTACTTATGGTGCACTTGATTTAGGTGGTTCTTCTTTGCAGGTTACTTTTGAGAGTGATCAGAGTTTGAATAGTGAGACTAGTTTGTATGTTAAGATTGGTTCGGTTAATCATCATTTAACGGCTTATTCTTTGGCGGGGTATGGTCTTAATGAAGCTTTTGATAAATCGGTTGCGTATGTTTTTAAGAAAGATAAGGTTGGTTTAGGTGGAACGGTGAAACATCCTTGTTTGCAATCTGGGTTTAAGAGTCAATATACGTGTTCTCGTTGTTCGTCTGGTGAGAGAGAAAGGGAAGGGGAGAGTCCTAAAGTTAATGGGAGTGAGAGTGTTGGAGGTGGTGGTGGAAAAGGTGAGTTGAAAACTTCGGTGACACTTGTTGGTGCGCCGAATTGGCAAGAATGTAGTGTGATTGGTAAGGTTGCTGTTAATTTGTCGGAATGGTCGGATGTTGGTAAGAGTCTTGATTGCGAAGTCAGTCCGTGTGCTTTGCGCGAGAATCTCCCTCGCCCGTTAGGTCATTTTTATGTGATTTCTGGATTTTTCGTGGTGTATAGGTTTTTCAATTTGAGTTCTGAGGCTAATATTGATGATGTGTTGGAAAAGGGCAGGGAGTTTTGTGAGAAAAAATGGGATGTTGCGAAGAAAAGTGTTGATCCACAGCCGTTTATTGAACAATATTGTTTCAGGGCACCTTATGTTGCTTCTTTGCTGAGAGAGGGCTTGCATATTACTGATAGAGATATAACTGTTGGTTCTGGAGGTATCACTTGGACACTTGGGGTGGCTTTGTTGGAAGCTGGGAAGTCTTATTCGACCAGATTTGGGCTTCATGGATTTGACTTGGTTCAGATGAAGACGAATCCTCTGATTCTTATTCCCATTTTGTTACTTTCTCTCATTCTTTTATGTTGCGCTTTATCATGTGTCCTCAAATGGGTGCCGAGATTTTTCCGGAGGCAATATCTTCCCCTCTTCAGGAATAACAACGGGTCCAGTGCATCTGTTCTTAATATCCCGTCTCCTTTATGGTTCAAGAGTTGGAGTCCAATTATTTCTGGAGAGTCAAGAATAAAGACACCACTTAGCCCAACAATTGCTGGTTCACAAGATAGACCATTTGGCCTGGGACCTGGTCTTGGTGATAACAGTGGAGGCATCCAGATGATGGAGTCTTCCTTTTACCCAGCAACTAGTAGTGTCTCACACAGTTATTCCTCTTCCAATTTAGGGCAGATGCCATTTGACAGTAGTAATATAGGGACCTTCTGGTCGCCCCACAGAAGTTTAGGGCATCATCATCTGGATTTTGGCGAATCAATTGGGACTGCCGAAGCTGAAAACTTTCTGGGCATTACCAGAACATCTTGTCATTCATTTCAGTTAATGTCACTAAGGCTAGAGAAGAGCTGGCAAGAGTATAATTCCAAACTAATTTGCTTCTCTGGATCTCTCACTTCTAAGCCAATTTCCTTCACAAGATTCCTTTCACAAATGAGCGAGCACTGTTGTTCCATCATTCATTACCACTCTTGTAGTGGCTAG 2349 0.4304 MVFGKPPGGKGNLRISSSLQDLTSYRHLDPQYSIPTLNSINQQQQQQQQQLLQNSTFSKTKPTQTLTPAHKKWARPITLSICFFILLILIIYTISSLYSHHSGKYYVVLDCGSTGTRVYVYKAELQTKQDTPFPISVTSLRNGLQKKRNSLSGRAYDRMETEPGLDKLVHNVTGLKAALKPLLKWAMKQIPVGAHKSTSLFLYATAGVRRLPNEDSKWLLQNAWTVLKGSSFVCRKEWVKIITGTEEAYFGWIALNYDNGVLGVKPRKATYGALDLGGSSLQVTFESDQSLNSETSLYVKIGSVNHHLTAYSLAGYGLNEAFDKSVAYVFKKDKVGLGGTVKHPCLQSGFKSQYTCSRCSSGEREREGESPKVNGSESVGGGGGKGELKTSVTLVGAPNWQECSVIGKVAVNLSEWSDVGKSLDCEVSPCALRENLPRPLGHFYVISGFFVVYRFFNLSSEANIDDVLEKGREFCEKKWDVAKKSVDPQPFIEQYCFRAPYVASLLREGLHITDRDITVGSGGITWTLGVALLEAGKSYSTRFGLHGFDLVQMKTNPLILIPILLLSLILLCCALSCVLKWVPRFFRRQYLPLFRNNNGSSASVLNIPSPLWFKSWSPIISGESRIKTPLSPTIAGSQDRPFGLGPGLGDNSGGIQMMESSFYPATSSVSHSYSSSNLGQMPFDSSNIGTFWSPHRSLGHHHLDFGESIGTAEAENFLGITRTSCHSFQLMSLRLEKSWQEYNSKLICFSGSLTSKPISFTRFLSQMSEHCCSIIHYHSCSG 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02141 782 Pfam GDA1/CD39 (nucleoside phosphatase) family 99 534 IPR000407 GO:0016787
Vifa4g02141 782 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 71 537 IPR000407 GO:0016787
Vifa4g02141 782 Gene3D Exopolyphosphatase. Domain 2 244 521 - -
Vifa4g02141 782 MobiDBLite consensus disorder prediction 362 385 - -
Vifa4g02141 782 Gene3D - 95 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02141 Vifa-Chr4 658742948 658748473 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g02141 8 697 Nodulin-like Gene Family AT4G19180 54.894 0.0 717
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02141 - - lja:Lj0g3v0174799.1 927.161