Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02140 ATGGGAGGTGCAGGGAGTGGTGAGATATGGAAAGCACACACCGCCATGGCGATTGTGCAGTTGTTCACCGGAGGTTATCATGTTATCACGAAATTGGCTCTTAATGTTGGAGTCAACCAGATTGTTTTTTGTGTTTTTCGTGATCTCCTTGCTCTCTCTATTCTCGCTCCCATCGCTTATTTCCGTGAAAGACGTACACGGCCACCCCTAACAAAGCACTTCGTGACATCATTTTTCTTTCTTGGATTAACTGGGATATTTGGAAATCATCTTTTGTTTCTTATTGGTTTAAGCTATACTACTCCAACATATGCTGCTGCGATTCAGCCATCTATTCCAGTCTTTACATTTGTGTTGGCTATAATGATGGGTACAGAAAGAGTAAACTTGCTAAGATATGAAGGTCTGGCCAAGGTTGGAGGAATTTTCGTCTGTGTTTTGGGTGCCTTAGTAATGGTTTTGTACCGTGGTCCAGCACTGATAGGATCTTCAGAACTGGACCTTATATCACATAGTGAAATAAGTGCCAGAGGTCAACCAGAGCCTTCTGGATGGTTAGTTAGTGGTTTAATGGATCTTGGATTTGACCATTTTCATCTCGGAGTTATGTGCTTCATAGGGAACTGCATGTGCATGGCTACTTTTCTATCCATTCAGGCTCCATTATTAAAAAAGTATCCTGCAAGCCTTTCTGTCACAGCATATTCATACTTCTTTGGAGCTTTACTGATGGTAACTACATCATACTTCGTAACCGATGAGTCAACTGACTGGAGTTTGAATCAGTCTGAAACATTTGCCGTTTTATATGCTGGAATTATTGCATCTGCACTTAATTATGGAATCATTACATGGAGCAACAAAATCTTGGGCCCAGCCATGGTTGCCCTTTATAATCCACTTCAACCTGGGGCAGCTGCTCTCTTATCTAGAATTTTTATTGGAAGTCCAATTTACATGGGAAGCGTGTTAGGTGGATCGCTAATCATTACTGGTCTGTATGCGGTTACTTGGGCATCATATAGAGAAAGACAGGCAGCTGCTGGAGTTATTCCTCATCATGCTTCTTCTTGGGTCTCTGAATCACTTAACAAGTCTCCGTTTCATAGAGTTAACATTTTCTCAGGCTCCTCTGGTTTATTATCCCCAAAGCCATCGGATTGA 1164 0.4184 MGGAGSGEIWKAHTAMAIVQLFTGGYHVITKLALNVGVNQIVFCVFRDLLALSILAPIAYFRERRTRPPLTKHFVTSFFFLGLTGIFGNHLLFLIGLSYTTPTYAAAIQPSIPVFTFVLAIMMGTERVNLLRYEGLAKVGGIFVCVLGALVMVLYRGPALIGSSELDLISHSEISARGQPEPSGWLVSGLMDLGFDHFHLGVMCFIGNCMCMATFLSIQAPLLKKYPASLSVTAYSYFFGALLMVTTSYFVTDESTDWSLNQSETFAVLYAGIIASALNYGIITWSNKILGPAMVALYNPLQPGAAALLSRIFIGSPIYMGSVLGGSLIITGLYAVTWASYRERQAAAGVIPHHASSWVSESLNKSPFHRVNIFSGSSGLLSPKPSD 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02140 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 259 342 - -
Vifa4g02140 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 155 - -
Vifa4g02140 387 PANTHER WAT1-RELATED PROTEIN 14 344 IPR030184 GO:0016020|GO:0022857
Vifa4g02140 387 Pfam EamA-like transporter family 15 152 IPR000620 GO:0016020
Vifa4g02140 387 Pfam EamA-like transporter family 200 337 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02140 Vifa-Chr4 658615792 658621097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g02140 95 361 Nodulin-like Gene Family AT5G45370 64.312 4.30e-123 355