Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02137 ATGGATTTTACCATCACTTTCTTTTTCTACTTTCTTTCTCTTCTCTTCATTCTCGTTCTTCTATTCAAATCCTTCTTTTTTTCTTCTAATGCTATACAATTGCCTCTCCCTCCTGGCTCTATGGGTTACCCTTACATAGGTGAAACCTTCCAAATGTATTCTCAAGACCCTAATCTTTTCTTTGCCAACAAAATCAAAAGGTATGGTGCTATGTTCAAGTCAAATATTTTGGGTTGTCCTTGTGTGATGATTTCAAGTCCAGAAGCAGCAAAATTTGTGTTAACCAAAGCACAACTTTTCAAACCAACTTTTCCAGCAAGCAAAGAAAGGATGTTAGGAAAACAAGCAATTTTCTTTCATCAAGGAAATTACCATACTAACCTTAGAAGACTTGTTCTTCGCACCTTCATGCCAGAAGCCATCAAAAGCATTGTTCACAACATTGAATCCATTGCTCAATCTTGTCTCAAATCATGGGACGGAAATCTAATCACCACTTACCTTGAAATGAAAACATTCACTTTCAACGTTGCGCTTCTATCAATTTTCGGAAAAGACGAAATTCTATATCGAGAAGATCTAAAAAGATGCTACTACACACTTGAGAAAGGGTACAATTCAATGCCAATAAACCTTCCAGGAACACTATTTCACAAAGCAATGAAAGCAAGAAAAGAACTAGCACAGATCTTGGAGCAAATAATCTCAACAAGGAGGTGCAAAAAGCAAGATTACAATGATTTGTTAGGTTCTTTCATGGATGAGAAAGCAGGACTGAGTGATGAACAAATATCAGATAACATGATTGGTGTTATTTTTGCAGCTCGTGACACAACTGCTAGTGTACTTACATGGATTGTTAAGTACCTTGGTGAAAATCCTACTGTCCTTCAATCTGTCACTGAAGAACAAATGTCTATATTAAAAGGGAAACAAAATAGTGGTGAAGAAATTGGTCTAACTTGGGAGGACACAAAAAATATGCCAATAACTTCAAGGGTCATACAAGAAACACTAAGAGTAGCATCAATTTTGTCTTTTACTTTTCGAGAAGCAACCCAAGATGTCGAATATCAAGGGTATCTTATACCAAAAGGATGGAAAGTATTGCCACTTTTCAGAAACATACATCACAGTCCAGAAAATTTCAAGGAGCCTAAAAAATTTGATCCTTCTAGATTTGAGGTTGCTCCAAAACCTAATACTTTCATGCCATTTGGAAATGGGGTCCATGCATGTCCTGGCAATGAATTAGCAAAGTTAGAGATTTTGGTTCTTGTACATCATCTAACCACAAAGTACAGGTGGTCTGTGGTTGGTGAAAAAAATGGAATTCAATATGGTCCTTTTGCTCTTCCACAAAATGGCTTACCAATCAAATTATATTCCAAGAAACAATAA 1401 0.3626 MDFTITFFFYFLSLLFILVLLFKSFFFSSNAIQLPLPPGSMGYPYIGETFQMYSQDPNLFFANKIKRYGAMFKSNILGCPCVMISSPEAAKFVLTKAQLFKPTFPASKERMLGKQAIFFHQGNYHTNLRRLVLRTFMPEAIKSIVHNIESIAQSCLKSWDGNLITTYLEMKTFTFNVALLSIFGKDEILYREDLKRCYYTLEKGYNSMPINLPGTLFHKAMKARKELAQILEQIISTRRCKKQDYNDLLGSFMDEKAGLSDEQISDNMIGVIFAARDTTASVLTWIVKYLGENPTVLQSVTEEQMSILKGKQNSGEEIGLTWEDTKNMPITSRVIQETLRVASILSFTFREATQDVEYQGYLIPKGWKVLPLFRNIHHSPENFKEPKKFDPSRFEVAPKPNTFMPFGNGVHACPGNELAKLEILVLVHHLTTKYRWSVVGEKNGIQYGPFALPQNGLPIKLYSKKQ 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02137 466 Gene3D Cytochrome P450 27 464 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02137 466 CDD CYP90-like 65 461 - -
Vifa4g02137 466 PRINTS E-class P450 group I signature 332 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02137 466 PRINTS E-class P450 group I signature 413 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02137 466 PRINTS E-class P450 group I signature 372 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02137 466 PRINTS E-class P450 group I signature 283 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02137 466 PRINTS E-class P450 group I signature 403 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02137 466 PRINTS E-class P450 group I signature 263 280 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02137 466 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02137 466 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 406 415 IPR017972 GO:0005506|GO:0016705
Vifa4g02137 466 PANTHER CYTOCHROME P450 26 34 441 - -
Vifa4g02137 466 PRINTS P450 superfamily signature 333 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02137 466 PRINTS P450 superfamily signature 274 291 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02137 466 PRINTS P450 superfamily signature 413 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02137 466 PRINTS P450 superfamily signature 404 413 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02137 466 FunFam Abscisic acid 8 27 463 - -
Vifa4g02137 466 Pfam Cytochrome P450 37 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g02137 466 SUPERFAMILY Cytochrome P450 33 462 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02137 Vifa-Chr4 655462515 655464938 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g02137 1 435 Cytochrome P450 AT5G45340 73.853 0.0 682
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02137 K09843 - gmx:100170674 772.311