Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02129 ATGGAGAGTTCAAGAATCATGCAATGGTTAAACATTCTTCTATGTGCACTGCTATTGTTACTAAAGACACAAGGACAGTTTGTTCCACTAACTCGGCTCGATAGCGCGGTATCAAAAGGAGCTGTGTGTTTGGATGGAAGCCCCCCAGCTTATCATTTTCAGGAAGGACATGAAGAAGGAGTTAACAACTGGATTGTTCACATTGAGGGAGGTGGATGGTGCCACAATGTCACATATTGTCTTTACCGAAAGGACAGTCGGTTAGGTTCCTCGCATGAAATGGAAGAGCAAACTTATTTTTCTGGATATTTAAGTAACAACCATCAATATAACCCTGATTTCTACAATTGGAATAGAGTCAAAGTTAGGTACTGTGATGGATCATCATTTACCGGTGATGTTGAAGAAGTTGATCCAGATACAAATTTATACTTCAGAGGATCAAGGATTTTTTCTGCTGTAATGGAAGAGTTACTAGCAAAAGGAATGGCTCATGCTGATAAAGCTATTCTTTCTGGATGTTCTGCTGGAGGATTAACCGCTATATTACACTGTGATCGATTTAAATCAATGTTACCTGATGGAACTAAAGTGAAATGTGTCTCAGATGCTGGCTATTTTGTTAATGTAAAAGATATCTCTGGAGATTATTACATTGAAGATTATTTCGGTCAAGTCGTTGAAACACATGGTTCGAAAAAGAGTTTGCCTCAATCTTGCACTTCAAGACTCACTCCAAGACTGTGTTTTTTCCCACAATATGTGGCATCAAATATCCGCACACCGATCTTCATTGTAAATGCAGCATATGACTCATGGCAGATTAAGAATATTTTGGCGCCTGGTGCTGCTGATCCGAACGGCCAATGGGGTAGCTGCAAAACTAATCTAAACAACTGCTCACCTGAACAACTAAATATAATGCAAGACTATAGGTCACAATTCTTAAAGGCATTGAGTCCTATAACCATCTCGCCATCTAATGGAGTATTCATAGACTCTTGCTATGTCCACTGCCAAACAGAACCACAGGAAACATGGTTTACAAATGACTCTCCAATGGTTGGCAATAAAACAGTTGCAATGGCAGTAGGAGACTGGTTTTATGAAAGAAGTCCTTCACGTGAGATAGATTGCATTTACCCTTGCAACCCCACTTGTCAGAACCAGAACCATGTTTTTGATGCACAAGCAAACCCAGGAATACACTAG 1212 0.3993 MESSRIMQWLNILLCALLLLLKTQGQFVPLTRLDSAVSKGAVCLDGSPPAYHFQEGHEEGVNNWIVHIEGGGWCHNVTYCLYRKDSRLGSSHEMEEQTYFSGYLSNNHQYNPDFYNWNRVKVRYCDGSSFTGDVEEVDPDTNLYFRGSRIFSAVMEELLAKGMAHADKAILSGCSAGGLTAILHCDRFKSMLPDGTKVKCVSDAGYFVNVKDISGDYYIEDYFGQVVETHGSKKSLPQSCTSRLTPRLCFFPQYVASNIRTPIFIVNAAYDSWQIKNILAPGAADPNGQWGSCKTNLNNCSPEQLNIMQDYRSQFLKALSPITISPSNGVFIDSCYVHCQTEPQETWFTNDSPMVGNKTVAMAVGDWFYERSPSREIDCIYPCNPTCQNQNHVFDAQANPGIH 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02129 403 Pfam Pectinacetylesterase 22 372 IPR004963 GO:0016787
Vifa4g02129 403 PANTHER NOTUM-RELATED 11 389 IPR004963 GO:0016787
Vifa4g02129 403 SUPERFAMILY alpha/beta-Hydrolases 143 273 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02129 Vifa-Chr4 653549765 653552273 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g02129 5 402 Carbohydrate Esterase AT4G19420 55.889 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02129 K19882 - gmx:100780707 587.8