Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02128 ATGGAAATGCAGAAAAGAATGAAGAGTACAAAAATGAACCATTTGTTAAGTCTTGTAATATGCACACTGCTATTAGTTAAAGCTGCTGAAGGGGTTGCTGTGCCAATCACTTATGTTCAAAGTGCAGTAGCAAAAGGAGCTGTTTGTTTGGATGGGAGTCCACCAGCTTACCACTTTGATAAGGGATTTGAAGCTGGAATTGATAACTGGATTGTTCACTTTGAGGGAGGAGGATGGTGTAACAATGCCTCTACTTGCCTAGACCGTAGGGACACTCGATTAGGATCGTCGAAGAAAATGGACACAACTCTTTCCTTTTCGGGATTTTTTAGTAATGGAAAAAAGTTTAATCCAGATTTCTACAATTGGAACAGAATCAAGGTTAGGTATTGTGACGGTTCATCATTTACTGGTGATGTTGAAGCTGTTGATCCAGCAACCAATTTGCACTACAGAGGAGGAAGAATATTTGTCGCTGTCATTGAGGATTTACTAGCAAAAGGAATGAAAAACGCTAAAAATGCAATTCTATCTGGATGTTCAGCTGGAGGATTGACTTCTATTTTACAATGCGATCACTTTAGAACTTTACTTCCTGCAGCAGCTAAAGTTAAATGTGTCTCGGATGCTGGTTATTTTATCAATGTAAAGGCCGTCTCTGGAGCACAACACATTGAACAATTCTACAGCCAAGTTGTTAAAACACATGCCTCGGCAAAGAATTTGCCTTCATCTTGCACTTCAAGACTTCCACCAGGGCTGTGTTTTTTTCCGCAAAACGTGGCCGCACAAATCAGCACACCAATCTTCTTTGTAAATGCAGCCTATGACTCATGGCAGATTAAGAATATTTTGGCACCCGGTGTTGCTGATCCCCATGGCACTTGGCGTAGCTGCAAGCTTGATATAAAAGATTGCTCAGCTAATCAATTAACCACAATGCAAGGTTTCAGGACAGATTTCTTAAAGGCAATTAGCGTGGTTAGTAATTCTCCATCTAAAGGAACGTTTATCGATGGTTGCTATTCCCACTGCCAAACTGGAATGCAGGAAACGTGGATGAGAAATGACTCTCCAGTCCTTGCCAATACAACAATAGCAAAGGCTGTGGGAGATTGGTATTTTGAGAGAAAGGGTTTTCATCAGATAGATTGTTCTTATCCTTGCAATCCTACTTGTCATAATCGTGTCTTTGAATAG 1200 0.4058 MEMQKRMKSTKMNHLLSLVICTLLLVKAAEGVAVPITYVQSAVAKGAVCLDGSPPAYHFDKGFEAGIDNWIVHFEGGGWCNNASTCLDRRDTRLGSSKKMDTTLSFSGFFSNGKKFNPDFYNWNRIKVRYCDGSSFTGDVEAVDPATNLHYRGGRIFVAVIEDLLAKGMKNAKNAILSGCSAGGLTSILQCDHFRTLLPAAAKVKCVSDAGYFINVKAVSGAQHIEQFYSQVVKTHASAKNLPSSCTSRLPPGLCFFPQNVAAQISTPIFFVNAAYDSWQIKNILAPGVADPHGTWRSCKLDIKDCSANQLTTMQGFRTDFLKAISVVSNSPSKGTFIDGCYSHCQTGMQETWMRNDSPVLANTTIAKAVGDWYFERKGFHQIDCSYPCNPTCHNRVFE 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02128 399 PANTHER NOTUM-RELATED 10 395 IPR004963 GO:0016787
Vifa4g02128 399 Pfam Pectinacetylesterase 29 378 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02128 Vifa-Chr4 652682919 652686495 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g02128 11 398 Carbohydrate Esterase AT4G19420 57.210 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02128 K19882 - gmx:100781246 658.677