Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa4g02122 | ATGGGCGATAATAGTGATGATCCACCTTTGTTTAGTAGCAGATTTGGGGTGGTACTGATTGCCATGGGCTCAGCTAGTTTTGTAGTAACAATGTACCATCTCATAGTCATTTGCTGCCAAAACTCATCTGAAGAAGCACGGCGGCACGAGCAACCGATGACACAAACGCCGAGCGGGGAAGAAGGAGGTTTTGTCGTGTCACATCAAATTCCTTCTCACAAATATGAGAAGAAAAATAATGATGATGAATGTGTGACTTGTGCTGTATGCTTGGGAGACTTTGAGGAGGGTGAAGAGTTGAGGACTATGCCTTCTTGTATACACTCTTTTCACGTGCCATGCATAGATATGTGGCTCCATTCGCATCCTAATTGTCCTGTTTGTCGCGCCGATGCCACGCCTTCCCCGGTGATGCCTAGCCGTTTACCGGAGCTTGGATCTGTCGAGGTGAACGTAGATCAAGGCATAGATATGGTTCAAATTATTGTTGTTCGATAA | 498 | 0.4578 | MGDNSDDPPLFSSRFGVVLIAMGSASFVVTMYHLIVICCQNSSEEARRHEQPMTQTPSGEEGGFVVSHQIPSHKYEKKNNDDECVTCAVCLGDFEEGEELRTMPSCIHSFHVPCIDMWLHSHPNCPVCRADATPSPVMPSRLPELGSVEVNVDQGIDMVQIIVVR | 165 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa4g02122 | 165 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 63 | 136 | IPR013083 | - | |
Vifa4g02122 | 165 | SUPERFAMILY | RING/U-box | 69 | 135 | - | - | |
Vifa4g02122 | 165 | ProSiteProfiles | Zinc finger RING-type profile. | 87 | 129 | IPR001841 | - | |
Vifa4g02122 | 165 | PANTHER | RING-H2 FINGER PROTEIN ATL51-RELATED | 12 | 132 | IPR044675 | - | |
Vifa4g02122 | 165 | CDD | RING-H2_EL5-like | 87 | 129 | - | - | |
Vifa4g02122 | 165 | SMART | ring_2 | 87 | 128 | IPR001841 | - | |
Vifa4g02122 | 165 | Pfam | Ring finger domain | 86 | 129 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa4g02122 | Vifa-Chr4 | 651576857 | 651577354 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa4g02122 | 17 | 133 | C3H Transcription Factor Family | AT5G17600 | 35.294 | 8.33e-20 | 82.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa4g02122 | - | - | lja:Lj0g3v0111029.1 | 188.348 |