Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02089 ATGCCAAGTGTGGCTGTAAAACTCTACAGCATATTCTTTAAGTTCCTCTTGAAGCACCGTTTACAAAACCGGATTCAAGCCCAACCCGACAATAACTCCAACTCGTTTGGTATCACTTCACGACCCGAAGAATCCGTCGCTAACTCTAACCCTTCTTTTACCGACGACGTCGCCACCAAGGATATCCACATCGATCCTTTCACTTCTCTCTCTATCCGAATCTTTCTTCCTCACTCCGCTCTTTCTCCTCCTGAGCCTCATTCCAAACCTAACTCCAAACCTAAACAACAAGCTCTCGAACCTGGATATGTACGGAGAAGTAGCTATGGTCCTCCGTTCAGGGAAGAGAAGCTCCGAGGGAGGAATAGTAACGCTGTTGAGGGTTTGAATTTGATGGGCGCTGGTGTTGAAACCGGTGCCGGTTTGTACCGTGGTTACTCGCTGGCGTTGGATAATCGGCGGAGGAAATTACCAGTGATGTTGCAGTTTCATGGTGGGGGGTGGGTTAGTGGTAGTAATGATTCGGTGGCGAATGATTTGTTTTGTCGGCGGATCGCCAAGCTTTGTGATGTGATTGTCGTTGCGGTTGGCTATAGGTTGGCGCCGGAGAGTAGGTATCCGGCTGCGTTTGAGGATGGGTTGAAGGTGTTGAATTGGTTGGCCAAGCAGGAGAATTTGGCCGAGTGTAGTAAATCTATGGGGGTTGGTGGAGGAAGCCATGGTGGTGGTGGTGGTGGGGAGTTTAACAAGGATAATCATAGGCATATTGTTGATTCTTTTGGTGCTTCAGTGGTGGAGCCTTGGTTGGCTAGTCATGGAGATCCAACAAGTGGTTTGTTAAGTTCTGATACTCTATACTGCCACTCACTGGCGGAGCCAGCGTCCGGCCAGCTAGGGCAGCTGCCCAGGCTCGGCCGCCTCGAATCACTTTCATGGAACCTCTCCCTCAATACGATGAACAAGACGACAACTCTTTCACTTTTCACTGCCTCCAATGAACTTGAAGAAGCTCATGCTATCTTTCCTCTTCTGGCATGCTCTTTGTGGATGTCGTTTGGTGTATATGTAACTGGTGTGCTCTTTCAGACAGCTGCTTTTGTCTCCTTTTTGCTTATTTCTCATGGTTACTGTATAATGTGCGAGCACCTTTCTTTAAATGAACGTCGTTCCACTGCCGCACTTGCATGTGTCTTTTACTTGACTCTAGTTGGTTACAAGGCTTCTGTTCCATACTTCACAGTAAGTTTCTTAGATGGTCGTTATAATATGCAATCCGATTGA 1281 0.477 MPSVAVKLYSIFFKFLLKHRLQNRIQAQPDNNSNSFGITSRPEESVANSNPSFTDDVATKDIHIDPFTSLSIRIFLPHSALSPPEPHSKPNSKPKQQALEPGYVRRSSYGPPFREEKLRGRNSNAVEGLNLMGAGVETGAGLYRGYSLALDNRRRKLPVMLQFHGGGWVSGSNDSVANDLFCRRIAKLCDVIVVAVGYRLAPESRYPAAFEDGLKVLNWLAKQENLAECSKSMGVGGGSHGGGGGGEFNKDNHRHIVDSFGASVVEPWLASHGDPTSGLLSSDTLYCHSLAEPASGQLGQLPRLGRLESLSWNLSLNTMNKTTTLSLFTASNELEEAHAIFPLLACSLWMSFGVYVTGVLFQTAAFVSFLLISHGYCIMCEHLSLNERRSTAALACVFYLTLVGYKASVPYFTVSFLDGRYNMQSD 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02089 426 PANTHER TRANSMEMBRANE PROTEIN 343 414 - -
Vifa4g02089 426 MobiDBLite consensus disorder prediction 81 121 - -
Vifa4g02089 426 Pfam alpha/beta hydrolase fold 160 242 IPR013094 GO:0016787
Vifa4g02089 426 SUPERFAMILY alpha/beta-Hydrolases 54 243 IPR029058 -
Vifa4g02089 426 Gene3D alpha/beta hydrolase 8 245 IPR029058 -
Vifa4g02089 426 MobiDBLite consensus disorder prediction 27 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02089 Vifa-Chr4 642752889 642756888 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g02089 1 280 Carbohydrate Esterase AT3G27320 59.717 2.88e-102 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02089 - - adu:107494848 370.163