Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02088 ATGCCAAGTGTGGCTGTAAAACTCTACAGCATATTCTTTAAGTTCCTCTTGAAGCACCGTTTACAAAACCGGATTCAAGCCCAACCCGACAATAACTCCAACTCGTTTGGTATCACTTCACGACCCGAAGAATCCGTCGCTAACTCTAACCCTTCTTTTACCGACGACGTCGCCACCAAGGATATCCACATCGATCCTTTCACTTCTCTCTCTATCCGAATCTTTCTTCCTCACTCCGCTCTTTCTCCTCCTGAGCCTCATTCCAAACCTAACTCCAAACCTAAACAACAAGCTCTCGAACCTGGATATGTACGGAGAAGTAGCTATGGTCCTCCGTTCAGGGAAGAGAAGCTCCGAGGGAGGAATAGTAACGCTGTTGAGGGTTTGAATTTGATGGGCGCTGGTGTTGAAACCGGTGCCGGTTTGTACCGTGGTTACTCGCTGGCGTTGGATAATCGGCGGAGGAAATTACCAGTGATGTTGCAGTTTCATGGTGGGGGGTGGGTTAGTGGTAGTAATGATTCGGTGGCGAATGATTTGTTTTGTCGGCGGATCGCCAAGCTTTGTGATGTGATTGTCGTTGCGGTTGGGTATAGGTTGGCGCCGGAGAGTAGGTATCCGGCTGTGTTTGAGGATGGGTTGAAGGTGTTGAATTGGTTGGCCAAGCAGGAGAATTTGGCCGAGTGTAGTAAATCTATGGGGGTTGGTGGAGGAAGCCATGGTGGTGGTGGTGGTGGGGAGTTTAACAAGGATAATCATAGGCATATTGTTGATTCTTTTGGTGCTTCAGTGGTGGAGCCTTGGTTGGCTAGTCATGGAGATCCAACAAGTGGTTTGTTAAGTTCTGATACTCTATACTGCCACTCACTGGCGGAGCCAGCGTCCGGCCAGCTAGGGCAGCTGCCCAGGCTCGGCCGCCTCGAATCACTTTCATGGAACCTCTCCCTCAATACGATGAACAAGACGACAACTCTTTCACTTTTCACTGCCTCCAATGAACTTGAAGAAGAGCAGTGGAATAATTTGCAGTGGACACTTAGTTTGATTCCGTTGATTAAAGCATTGCAGCTCATGCTATCTTTCCTCTTCTGGTATTCATGCTTCAATTTCAAGGCATGCTCTTTGTGGATGTCGTTTGGTGTATATGTAACTGGTGTGCTCTTTCAGACAGCTGCTTTTGTCTCCTTTTTGCTTATTTCTCATGGTTATTGTATAATGTGCGAGCACCTTTCTTTAAATGAACGTCGTTCCACTGCCGCACTTGCATGTGTCTTTTACTTGACTCTAGTTGGTTACAGGGCTTCTGTTCCATACTTCACAGTAAGTTTCTTAGATGGTCGTTATAATATGCAATTCGATTGA 1362 0.4692 MPSVAVKLYSIFFKFLLKHRLQNRIQAQPDNNSNSFGITSRPEESVANSNPSFTDDVATKDIHIDPFTSLSIRIFLPHSALSPPEPHSKPNSKPKQQALEPGYVRRSSYGPPFREEKLRGRNSNAVEGLNLMGAGVETGAGLYRGYSLALDNRRRKLPVMLQFHGGGWVSGSNDSVANDLFCRRIAKLCDVIVVAVGYRLAPESRYPAVFEDGLKVLNWLAKQENLAECSKSMGVGGGSHGGGGGGEFNKDNHRHIVDSFGASVVEPWLASHGDPTSGLLSSDTLYCHSLAEPASGQLGQLPRLGRLESLSWNLSLNTMNKTTTLSLFTASNELEEEQWNNLQWTLSLIPLIKALQLMLSFLFWYSCFNFKACSLWMSFGVYVTGVLFQTAAFVSFLLISHGYCIMCEHLSLNERRSTAALACVFYLTLVGYRASVPYFTVSFLDGRYNMQFD 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02088 453 SUPERFAMILY alpha/beta-Hydrolases 55 243 IPR029058 -
Vifa4g02088 453 PANTHER TRANSMEMBRANE PROTEIN 335 441 - -
Vifa4g02088 453 MobiDBLite consensus disorder prediction 81 121 - -
Vifa4g02088 453 Gene3D alpha/beta hydrolase 6 246 IPR029058 -
Vifa4g02088 453 Pfam alpha/beta hydrolase fold 160 242 IPR013094 GO:0016787
Vifa4g02088 453 MobiDBLite consensus disorder prediction 27 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02088 Vifa-Chr4 642561843 642565841 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g02088 1 280 Carbohydrate Esterase AT3G27320 59.364 2.88e-101 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02088 - - adu:107494848 368.622