Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02083 ATGCTATCTTTCTCATCAGCTCAAGGATATCTACAATTTCAAGTGGAGATTCAATTTTGCGCTGCTTACATTTTCATCGGGGTTGTTTGCATTCTTCTTTATTTTGGAGGTCAAAAGCAAAGAGTTGCAATTGGAAGAGCAATTTTGAAAGATCCAAAAATATTACTTCTTGATGAAGCTACAAGTGCCCTTGATGCCGAGTGTGCATGTATTGATACTAACTTGTGCATTTGTATGTTCTTTTTAAACCTTGGTGATTTCCTTGTGCAGAAACTAGGGGAAGGTGTGAAAGGGGTGTATATCTCGATAGACGTGGATTGTCTTGATCCTGCATTTGCTCCGGGAGTGTCTCATATTGAATCGGGAGGTCTTTCTTTCCGCGATGTTCTTAACATCCTACACAATCTTCAAGGTGATGTTGTTGCTGGAGACGTCGTTAAACTCAACCCACAACGCGATACTGTTGATGGAATGACTGCTATGGTAGCTGCTAAGTTGGTCAGAGAAATGGCTGCAAAGATTGCAAAATGA 531 0.4068 MLSFSSAQGYLQFQVEIQFCAAYIFIGVVCILLYFGGQKQRVAIGRAILKDPKILLLDEATSALDAECACIDTNLCICMFFLNLGDFLVQKLGEGVKGVYISIDVDCLDPAFAPGVSHIESGGLSFRDVLNILHNLQGDVVAGDVVKLNPQRDTVDGMTAMVAAKLVREMAAKIAK 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02083 176 Pfam Arginase family 90 170 IPR006035 GO:0046872
Vifa4g02083 176 ProSitePatterns Arginase family signature. 102 123 IPR020855 GO:0016813|GO:0046872
Vifa4g02083 176 Gene3D - 36 68 IPR027417 -
Vifa4g02083 176 SUPERFAMILY Arginase/deacetylase 86 172 IPR023696 -
Vifa4g02083 176 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 68 IPR027417 -
Vifa4g02083 176 Pfam ABC transporter 36 62 IPR003439 GO:0005524
Vifa4g02083 176 ProSiteProfiles Arginase family profile. 86 176 IPR006035 GO:0046872
Vifa4g02083 176 PANTHER ARGINASE/AGMATINASE 89 176 IPR006035 GO:0046872
Vifa4g02083 176 Gene3D Ureohydrolase domain 80 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02083 Vifa-Chr4 626671419 626672648 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g02083 36 68 Calmodulin-binding Proteins AT2G36910 78.788 1.12e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02083 K01476 - gmx:100789799 164.851