Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02080 ATGCTATCTTTCTCATCAGCTCAAGGATATCTACAATTTCAAGTAGAGGGAGGTCAAAAGCAAAGAGTTGCAATTGGAAGAGCAATTTTGAAAGATCCAAAAATATTACTTCTTGATGAAGCTACAAGTGCCCTTGATGCCGAGTGTGCATGTATTGATACTAACTTGTGCATTTGTATGTTCTTTTTAAACCTTGGTGATTTCCTTGTGCAGAAACTAGGGGAAGGTGTGAAAGGGGTGTATATCTCGATAGACGTGGATTGTCTTGATCCTGCATTTGCTCCGGGAGTGTCTCATATTGAACCGGGAGGTCTTTCTTTCCGCGATGTTCTTAACATCCTACACAATCTTCAAGGTGATGTTGTTGCTGGAGACGTCGTTGAACTCAACCCACAACGCGATACTGTTGATGGAATGACTGCTATGGTAGCTGCTAAGTTGGTCAGAGAAATGGCTGCAAAGATTGCAAAATGA 474 0.4177 MLSFSSAQGYLQFQVEGGQKQRVAIGRAILKDPKILLLDEATSALDAECACIDTNLCICMFFLNLGDFLVQKLGEGVKGVYISIDVDCLDPAFAPGVSHIEPGGLSFRDVLNILHNLQGDVVAGDVVELNPQRDTVDGMTAMVAAKLVREMAAKIAK 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02080 157 SUPERFAMILY Arginase/deacetylase 67 153 IPR023696 -
Vifa4g02080 157 Gene3D - 14 49 IPR027417 -
Vifa4g02080 157 PANTHER ARGINASE/AGMATINASE 70 157 IPR006035 GO:0046872
Vifa4g02080 157 ProSiteProfiles Arginase family profile. 67 157 IPR006035 GO:0046872
Vifa4g02080 157 Pfam Arginase family 71 151 IPR006035 GO:0046872
Vifa4g02080 157 Pfam ABC transporter 14 43 IPR003439 GO:0005524
Vifa4g02080 157 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 17 49 IPR027417 -
Vifa4g02080 157 Gene3D Ureohydrolase domain 61 157 - -
Vifa4g02080 157 ProSitePatterns Arginase family signature. 83 104 IPR020855 GO:0016813|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02080 Vifa-Chr4 611156665 611157894 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g02080 4 49 Calmodulin-binding Proteins AT2G36910 63.043 7.60e-12 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02080 K01476 - gmx:100789799 169.474