Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02055 ATGGCGGAGCAGCGAAACCGTTGGAGCTGGGACGTTACCGGCTTCGAGCCGTGGAAGTCGTCATCGCCGTCGACTTCAGTACCGGCGGAGCACGACGATCGGAAACCTAATCCGCCGTTGGGGAGGAGATACTCCATTTCGTCTTCATCGATTATTCCGCAGCAGAGAAACACTACAGCGTCTAAGCTTCAACGGTTAAAGGATAAAGTTAAGCTTGCTAGAGACGACTATTTGCAGTTAAGACAAGAAGCAAGTGAGCTTCAAGACTATTCAAATGCAAAACTCGATAGAGTTACACGATATCTCGGTGTACTTGCTGAGAAAACCCGCAAGCTAGATCAAGTTGCCCTTGAAACTGAAGCAAGAATATCACCACTGATCAATGAGAAAAAGAGATTGTTCAATGATTTATTGACATCTAAAGGAAGCATACGCATATTCTGTCGGACAAGACCGTTATTTGAAGATGAAGGTCATTCAGTTGTTGATTTTCCCGATGATTACACCATTCGTGTGAATACTGGCGATGAGTCCCTGGCTAATTCCAAAAAAGATTATGAATTTGATAAAGTTTATGGTCCTCATGTTGGACAAGCTGATTTATTCAGTGATGTTCAACCATTGGTGCAGTCAGCTTTGGATGGATATAATGTTTCCATATTTGCCTATGGTCAAACCCATTCCGGCAAAACACACACTATGGAAGGATCCAGTTATGACCGAGGTTTATATGCTCGGTGTTTTGAGGAGTTGTTTGATTTAGCCAACTTAGATACAACCTCTACTTCTCAATATAAATTCTGTGCTACAGTTTGTGAGCTTTATAATGAACAGACAAGGGATCTACTTTTGGAGTCTGGGAAAGACATGCCAAAGCTCTGCATTGGATCGGCTGAAAATTTTGTAGAACTGGTTCAGGAAAAAGTCAATAACCCTTTGGAATTCTCTACAGTTCTAAAAACTGCATTTCGGAATCGGGGAAATGATTTATTAAAGATCAATGTATCTCATTTGATTGTCACAATACACATATTTTACAACAATTCGATCACTGGTGAGAACTCATATAGCAAACTTTATCTGGTTGACTTGGCTGGAAGTGAAGGTTCAATAACAGAAGATGACAGTGGTGAGCGTGTCACAGATTTGCTGCATGTTATGAAGTCACTTTCAGCGTTGGGAGATGTTTTGTCTTCTTTGACATCCAAGAAGGATATTATTCCTTACGAAAATTCAATGCTAACAAAACTACTAGCAGATTCACTTGGTGGGAGTTCAAAAACTTTGACGATCGTGAATGTCTGTCCAAGTGTTTCAAATTTATCAGAGACATTGATGTCTCTCAATTTTTCTGCCCGAGCTAGAAATTCTGTCTTAAGTCTTGGAAACCGAGATACTATAAAGAAATGGAGAGATGTAGCAAATGATGCCCGTAAGGAGTTGTATGAGAAGGAAAAAGAAATTCATGATCTAAAGCAAGAGAGTCTGGTACTCAAGCAAGCACTTAAAGATGCTAACGATCAGTGCATTTTACTCTTCAATGAAGTACAGAAGGCATGGAAAGTTTCCTCTGCATTGCAAACTGATTTAAAGTCAGAGCATATTTTGCTTTCAGATAAGTATAAAAATGAGAAAGAAGAAAGTACTCAGCTTAGAAATCAAGTTGCTCAGCTGTTACAGGTAGAACAAGATAAAAAATTGCAGATACAACAGCAAGATTCAACCATCCAAAGTTTGCAGGTTAAAATCAGAACCCTTGAAACTGAACTCAGGGAAGCTCTTGGATCCAGAAAAAGTAGTTCAACCTTGGTTTCAGAGCCAGAGTCTGTAGCTCTATCTGATTCCAGACCAACTGGAGACGGCACTGTGGTAACCAAAAAATTAGAAGAGGAACTCAAGAAACGCGATGCTCTGATTGAGAGATTGCATGAAGAAAATGAGAAATTGTTTGATAGATTGACTGTGAAAGCATCTGTGGTTGGCTCACCCGTGTTGGCACCTTCTTTTCAGCCGTCAAGTCCAATATCTCGTGAATCAGTTAATATTCAACCTCAAAATACGATAAGGAATGGCACTAGCAACAACACAGTAGCAAATTCGACGAATGCTCTTACTTCACCTTTGACTTCTGCTGCTAAGAATGATGGAACAGTTGCTTTGGTTAAATCTGGCTCCGAAATTGTCAAGACTACCCCTGCGGGTGAATATCTTACTACTGCTCTGAATGACTTTGATCCAGATCAATATGAAGGTCATGCTGCAATTTCCGACGGTGCGAACAAGCTTTTGATGCTGGTTTTGGCCGCTGTCATCAAAGCTGGTGCCTCTAGAGAGCATGAGATACTTGCTGAAATTAGAGATTCTGTTTTCTCTTTTATTAGGAAAATGGAACCAAAGCGAGTAATGGACACTATGCTTGTTTCACGTGTTAGAATTTTGTATATAAGATCTTTACTTGCAAGGTCCCCAGAATTGCAATCAATTAAGGTCTTGCCTGTCGAGTGCTTTCTTGAGAAGGCTAATACGGGGCGCAGTAGAAGTTCCAGCCGAGGAAATAGTCCTGGAAGGTCTCCTGTGCAATATGTTGATGAGCAGATCCAGGGATTTAAAGTGAATTTAAAGCCAGAAAAGAAGTCCAAATTTTCATCTGTTGTGTTGAAGATTCGTGGGATTGATCAGGAAATCTGGAGACAGCAGGTGACTGGTGGGAAGCTTAGAGAAATTACTGAGGAAGCCAAAAGTTTTGCAATAGGTAACAAGGCTCTTGCTGCACTCTTTGTACATACTCCGGCCGGTGAGCTTCAGCGCCAAATTAGATCCTGGCTTGCTGAGAGTTTTGACTTTCTATCTGTTTCTGGAAATGATGCAACTGGGGGGTCAACTGGTCAGTTGGAACTTCTTTCAACAGCAATTATGGATGGTTGGATGGCTGGACTTGGTGCTGCTCTACCTCCACACACTGATGCCCTTGGCCAGCTATTATTTGAGTATTCAAAACGTGTATATACTTCTCAACTACAGCACTTAAAGGATATTGCTGGTACCTTGGCAACAGAAGAGGCTGAAGATGCAGCACAAGTAGCCAAGTTGCGTTCAGCTCTTGAGTCTGTTGATCATAAAAGAAGGAAGATTCTGCAACAAATGAGAAGTGATGTAGCTTTATTGACATTGGAAAATGGGGGTTCGCCTATCTTAAATCCTTCTACTGCAGCTGAAGATGCAAGATTAGCGTCTCTCATTTCACTTGATGGAATATTAAAGCAGATCAAGGATATAACAAGACAATCTGCTGTGAACATCTTAAGCAAAAGTAAGAAAAGAGCAATGCTTGCTTCTCTTGATGAACTAAAAGAACAGATGCCTTCACTACTTGAAATTGATCATCCATGTGCTCAGAGCCAGATTTCCAATGCTTGCTGCATGGTTGAGTCAATTCCTGAAGAAGATGACCGCATTCAAGATCTATCTCATGTTCGCAAGCCATCAACAGATCTAAGCACCGGATCTGAAATTGACGTGGCACAGTGGAATGTGCTCCAGTTTAATACAGGCTCTGCCACACCATTTATAATAAAATGTGGAGCAAACTCAAACTCAGAACTAGTCATTAAAGCTGAAGCTCGAGTTCAAGAACCTAAAGGTGGTGAAATTGTGAGGGTTGTCCCTAGGCCCTTGGTTTTGGAAAGTTTGAACTTGGACGAAATGAAACAAATATTTTCTGAACTGCCTGAGGCTCTAAGCTTGCTTGCCCTAGCAAGGACTGCAGATGGCACTCGAGCACGTTATTCTAGATTGTATAAAACCTTAGCTTCTAAAGTTCCATCTCTTAGAGATTTGGTCAATGAACTCGAAAAAGGGGGTGCACTCAAAGATGCCAGAACATGA 3885 0.4116 MAEQRNRWSWDVTGFEPWKSSSPSTSVPAEHDDRKPNPPLGRRYSISSSSIIPQQRNTTASKLQRLKDKVKLARDDYLQLRQEASELQDYSNAKLDRVTRYLGVLAEKTRKLDQVALETEARISPLINEKKRLFNDLLTSKGSIRIFCRTRPLFEDEGHSVVDFPDDYTIRVNTGDESLANSKKDYEFDKVYGPHVGQADLFSDVQPLVQSALDGYNVSIFAYGQTHSGKTHTMEGSSYDRGLYARCFEELFDLANLDTTSTSQYKFCATVCELYNEQTRDLLLESGKDMPKLCIGSAENFVELVQEKVNNPLEFSTVLKTAFRNRGNDLLKINVSHLIVTIHIFYNNSITGENSYSKLYLVDLAGSEGSITEDDSGERVTDLLHVMKSLSALGDVLSSLTSKKDIIPYENSMLTKLLADSLGGSSKTLTIVNVCPSVSNLSETLMSLNFSARARNSVLSLGNRDTIKKWRDVANDARKELYEKEKEIHDLKQESLVLKQALKDANDQCILLFNEVQKAWKVSSALQTDLKSEHILLSDKYKNEKEESTQLRNQVAQLLQVEQDKKLQIQQQDSTIQSLQVKIRTLETELREALGSRKSSSTLVSEPESVALSDSRPTGDGTVVTKKLEEELKKRDALIERLHEENEKLFDRLTVKASVVGSPVLAPSFQPSSPISRESVNIQPQNTIRNGTSNNTVANSTNALTSPLTSAAKNDGTVALVKSGSEIVKTTPAGEYLTTALNDFDPDQYEGHAAISDGANKLLMLVLAAVIKAGASREHEILAEIRDSVFSFIRKMEPKRVMDTMLVSRVRILYIRSLLARSPELQSIKVLPVECFLEKANTGRSRSSSRGNSPGRSPVQYVDEQIQGFKVNLKPEKKSKFSSVVLKIRGIDQEIWRQQVTGGKLREITEEAKSFAIGNKALAALFVHTPAGELQRQIRSWLAESFDFLSVSGNDATGGSTGQLELLSTAIMDGWMAGLGAALPPHTDALGQLLFEYSKRVYTSQLQHLKDIAGTLATEEAEDAAQVAKLRSALESVDHKRRKILQQMRSDVALLTLENGGSPILNPSTAAEDARLASLISLDGILKQIKDITRQSAVNILSKSKKRAMLASLDELKEQMPSLLEIDHPCAQSQISNACCMVESIPEEDDRIQDLSHVRKPSTDLSTGSEIDVAQWNVLQFNTGSATPFIIKCGANSNSELVIKAEARVQEPKGGEIVRVVPRPLVLESLNLDEMKQIFSELPEALSLLALARTADGTRARYSRLYKTLASKVPSLRDLVNELEKGGALKDART 1294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02055 1294 FunFam kinesin-like protein KIN-14B isoform X1 90 458 - -
Vifa4g02055 1294 Coils Coil 625 648 - -
Vifa4g02055 1294 ProSiteProfiles Kinesin motor domain profile. 143 457 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa4g02055 1294 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 500 IPR027417 -
Vifa4g02055 1294 ProSitePatterns Kinesin motor domain signature. 357 368 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vifa4g02055 1294 PANTHER KINESIN-LIKE PROTEIN KLP-3 51 620 IPR027640 GO:0003777|GO:0007018
Vifa4g02055 1294 Gene3D Kinesin motor domain 87 457 IPR036961 -
Vifa4g02055 1294 SMART kinesin_4 141 465 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa4g02055 1294 MobiDBLite consensus disorder prediction 596 620 - -
Vifa4g02055 1294 Pfam Kinesin motor domain 149 456 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa4g02055 1294 Coils Coil 541 561 - -
Vifa4g02055 1294 MobiDBLite consensus disorder prediction 42 61 - -
Vifa4g02055 1294 Coils Coil 569 596 - -
Vifa4g02055 1294 Coils Coil 467 508 - -
Vifa4g02055 1294 Coils Coil 63 83 - -
Vifa4g02055 1294 MobiDBLite consensus disorder prediction 596 621 - -
Vifa4g02055 1294 PRINTS Kinesin heavy chain signature 358 376 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa4g02055 1294 PRINTS Kinesin heavy chain signature 215 236 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa4g02055 1294 PRINTS Kinesin heavy chain signature 407 428 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa4g02055 1294 MobiDBLite consensus disorder prediction 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02055 Vifa-Chr4 598466512 598486586 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g02055 130 458 Calmodulin-binding Proteins AT5G65930 37.537 1.99e-50 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02055 - - mtr:25502890 2256.87