Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02053 ATGGAGAGAGATGACAAAACTCCACAAGAGCCAGTCTCCTACCACTCCTCTCTCCGTTCAGGTGCCACTTTGCTCTCACGCCGAATGTTCCGTACTTGCCGCAACTTCATCCAACGCCAACCAAGATCTGACCCAGAAATTGCTACTCAACTCGACCGCATGCTCGCAATAATCGATGTCTTGGAGGCCGCGTCACTCCGAGTGGGTCTCGGCAACAATCTTCCTGATCACTATGCCATACTCCAACTCAAACCCTCCGACGACACCACAAACCGCGATTTAGTGCGGCAGCGTTACAAGACTCTTGTTCGCAAGCTTGACCCAAACAAGAACATGTTTCCTTTAGCCGAAGAAGCCCTCATGAAAGTCCGTGAATCCTGGCAAGTTCTCTCTGACCCGGTTCAGTTAGACCGGTTTGAAAAGGAGCTTAAGGGAGAGGCTGAGGTTGTTTCACCGGCTTCGTTTTGGACTATGTGTCCTTATTGCTGGTATTTGCATGAGTATGAGAAGAAATACGAAGATTTTACTCTTCGATGTGGGAACTGTCAGAGAACCTTTCACGGATCTCCGGTGAAGCCGCCGGAACCGGAGTCGATGGTGGAGGGAAAAGAACAGTACTATTGCTATCACATGAGTTTGCCCTTGAGGTATCCCGTGGATGAAAATTGTAGCTTTGAAATTGGGGGTAATGGGGGTAGGAAGATGAGGATAAAGACTGTGGCTAATAGGTCTAAAGTGAAAGGGTTTGTTGTTCCGGATAGTGAATCTGAATCGGATCCTGAAATGGAAGTGGAGCTGTGA 801 0.4856 MERDDKTPQEPVSYHSSLRSGATLLSRRMFRTCRNFIQRQPRSDPEIATQLDRMLAIIDVLEAASLRVGLGNNLPDHYAILQLKPSDDTTNRDLVRQRYKTLVRKLDPNKNMFPLAEEALMKVRESWQVLSDPVQLDRFEKELKGEAEVVSPASFWTMCPYCWYLHEYEKKYEDFTLRCGNCQRTFHGSPVKPPEPESMVEGKEQYYCYHMSLPLRYPVDENCSFEIGGNGGRKMRIKTVANRSKVKGFVVPDSESESDPEMEVEL 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02053 266 SUPERFAMILY Chaperone J-domain 72 140 IPR036869 -
Vifa4g02053 266 CDD PHD_SF 158 208 - -
Vifa4g02053 266 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 18 222 - -
Vifa4g02053 266 SMART dnaj_3 75 135 IPR001623 -
Vifa4g02053 266 Pfam DnaJ domain 76 135 IPR001623 -
Vifa4g02053 266 SUPERFAMILY FYVE/PHD zinc finger 154 209 IPR011011 -
Vifa4g02053 266 Gene3D DnaJ domain 71 152 IPR036869 -
Vifa4g02053 266 ProSiteProfiles dnaJ domain profile. 76 145 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02053 Vifa-Chr4 598040082 598040882 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g02053 24 232 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 31.111 4.96e-35 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02053 - - psat:127074958 442.965