Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01965 ATGGAAGCCAATCAAGCTGCTACCAAGGCTACTAAGTTTGTATCACGAAACCCTGTGGGTAGTGGGTACGTAGAATCATTGACCATGGATAACTTGCTTACGAACTTCTCTGGCAACTTAGTGCATCTAATTGTTGAGGCATGTATTGCAAGAAATATACTCGATACATCAGCATATTTTTGGCCTGGCTATGTGAAGCCCCGCAACAATCAAATTCCTTTCAGCATTTCTAACCATGTGGATGGCTGGTCTGCATTGATGAAGGGATCACAGTTAACTCCTAGATTAGTTGATGTCTTAGTTGCAACTCCTGCTTCCAGCTTAGCGGAGATTGAAAAGATATATGAAATTGCAATCAGTGGTTCAGACGAAGAGAAGATATCTGCTGCTACCATTCTGTGTGGGGCATCTCTAGTACGTGGATGGAATATACAGGAACACAGTATTATTTTTATCACAATGTTGCTCACGCCAGTTGGTCTGCCTAATCACACTGAGACTGAAAGCCATTTGATCAACCTGCTCTCACATGGGTCTCTGCCAATAGTGAAAGACTTTTCCGGATTGATTCCAATTTTGAACTTAAGATGCACACGCTGCACTGATCCCGACACGGATGAAGTGTATGCAAAACTAAGGCTCTTTCCTCTGCATCCTAGCGATGTTAATTTTGATGGTGACACTGTTGCTGGCGTCAATGATAATCTGATGCAATCCTATACAAAGACCTTGACACAATCTGATGCAAATAATGGTGGTTTCGCTTGTCCTAAGAATTGTACAGAAATAATTCTTCCTCCATTAGACTGTTCAGATAGGCTTCCTTCTCAGGACAACTGGACTAGGGGGATTCACTTGTGTTTGTGA 867 0.4233 MEANQAATKATKFVSRNPVGSGYVESLTMDNLLTNFSGNLVHLIVEACIARNILDTSAYFWPGYVKPRNNQIPFSISNHVDGWSALMKGSQLTPRLVDVLVATPASSLAEIEKIYEIAISGSDEEKISAATILCGASLVRGWNIQEHSIIFITMLLTPVGLPNHTETESHLINLLSHGSLPIVKDFSGLIPILNLRCTRCTDPDTDEVYAKLRLFPLHPSDVNFDGDTVAGVNDNLMQSYTKTLTQSDANNGGFACPKNCTEIILPPLDCSDRLPSQDNWTRGIHLCL 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01965 288 PANTHER OS07G0681500 PROTEIN 2 174 IPR039638 GO:0016592|GO:2000762
Vifa4g01965 288 ProSitePatterns Caspase family histidine active site. 164 178 IPR016129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01965 Vifa-Chr4 572541866 572542900 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01965 202 285 B3 DNA Binding Superfamily AT2G28350 44.211 9.16e-14 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01965 - - mtr:25499095 259.996