Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01955 ATGATACAACTTGAATCCAACGACATATTTTCTATTTGTAAGGAGGCACCAAAGCGGTTGGGTTGTGGAGTTAAAGGGATTTTGAAAATTATAGGGCACAAGTGGTTCAAACCGATCAATTGGAAGAAGTTAGATGCACGTGAAATCAAACCCAGCTTTAGGCCAGAAGTAGTTGGGAATTATTGTGTTGCAAACTTTGATAAGTGCTGGATTGATAAGTCAGTTGTTGATTCATCAGCTGCAAGCCCAAATGATGGAAACCCCTTCAAGGACTTCTCTTATGTCAGACCTGCAACCTCTTTTCTTCAAAATAATAGCCCTGCTTGCTAA 330 0.4 MIQLESNDIFSICKEAPKRLGCGVKGILKIIGHKWFKPINWKKLDAREIKPSFRPEVVGNYCVANFDKCWIDKSVVDSSAASPNDGNPFKDFSYVRPATSFLQNNSPAC 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01955 109 PANTHER RIBOSOMAL PROTEIN S6 KINASE 13 99 - -
Vifa4g01955 109 Gene3D Transferase(Phosphotransferase) domain 1 13 55 - -
Vifa4g01955 109 ProSiteProfiles AGC-kinase C-terminal domain profile. 37 104 IPR000961 GO:0004674|GO:0005524|GO:0006468
Vifa4g01955 109 SMART pkinase_C_6 37 96 IPR000961 GO:0004674|GO:0005524|GO:0006468
Vifa4g01955 109 Gene3D Phosphorylase Kinase; domain 1 56 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01955 Vifa-Chr4 567521582 567522104 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01955 14 106 AGC Kinase Gene Family AT3G08720 58.333 6.02e-36 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01955 K04688 - gmx:100805922 152.525