Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01917 ATGGAGAGTCAGGATCATCTTTCACCATCTCACGTGGACGTATCTCGACCGTCCCTTGGTTTCCCCTTGGGCACTGCTCTTCTCTTGATCATCATTTTTAGCTTGAGTGGCATCCTTTCTTGTTGCTACCATTGGGATAAACTCCGTTCCCTCCGTCAATCTTTCTCCGATTCCGACGCTCAAATTGATTCAACCAATAAATCTAAACTTTACTCCATCGAGAAGAAGCAAAACTGTGGAGAAAGCTATTCAGTGATGATGCCAGGAGATGATGTGCCAAGATTCATAGCGATGCCGTGTCCGTGTGAACCTTCACGGCCGGAAAATATTGTTGTGACGGTTGAGAAACCGCCGCCACCGATAAAGCCACCGCGACTAGCGATTCCTTTGTATTTGTAA 399 0.4662 MESQDHLSPSHVDVSRPSLGFPLGTALLLIIIFSLSGILSCCYHWDKLRSLRQSFSDSDAQIDSTNKSKLYSIEKKQNCGESYSVMMPGDDVPRFIAMPCPCEPSRPENIVVTVEKPPPPIKPPRLAIPLYL 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01917 132 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 2 120 IPR037699 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01917 Vifa-Chr4 540325419 540326053 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01917 25 100 Glutamine Dumper (GDU) Family AT2G24762 36.842 3.93e-07 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01917 - - gmx:100803062 182.57